Experiment: Matrix:KB soft agar;Phage:cocktail;Temp:17;Samp:22-2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_08555 and OLJFJH_08560 are separated by 139 nucleotides OLJFJH_08560 and OLJFJH_08565 overlap by 4 nucleotides OLJFJH_08565 and OLJFJH_08570 are separated by 89 nucleotides
OLJFJH_08555: OLJFJH_08555 - peroxiredoxin, at 1,753,586 to 1,754,149
_08555
OLJFJH_08560: OLJFJH_08560 - Holliday junction resolvase RuvX, at 1,754,289 to 1,754,714
_08560
OLJFJH_08565: OLJFJH_08565 - YqgE/AlgH family protein, at 1,754,711 to 1,755,274
_08565
OLJFJH_08570: OLJFJH_08570 - glutathione synthase, at 1,755,364 to 1,756,308
_08570
Position (kb) 1754
1755
1756 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 1753.726 kb on + strand, within OLJFJH_08555 at 1753.956 kb on + strand, within OLJFJH_08555 at 1753.957 kb on - strand, within OLJFJH_08555 at 1753.957 kb on - strand, within OLJFJH_08555 at 1753.957 kb on - strand, within OLJFJH_08555 at 1754.095 kb on + strand at 1754.095 kb on + strand at 1754.195 kb on - strand at 1754.200 kb on + strand at 1754.201 kb on - strand at 1754.201 kb on - strand at 1754.201 kb on - strand at 1754.201 kb on - strand at 1754.251 kb on + strand at 1754.252 kb on - strand at 1754.297 kb on - strand at 1754.790 kb on - strand, within OLJFJH_08565 at 1754.996 kb on - strand, within OLJFJH_08565 at 1755.078 kb on - strand, within OLJFJH_08565 at 1755.078 kb on - strand, within OLJFJH_08565 at 1755.200 kb on - strand, within OLJFJH_08565 at 1755.200 kb on - strand, within OLJFJH_08565 at 1755.202 kb on - strand, within OLJFJH_08565 at 1755.202 kb on - strand, within OLJFJH_08565 at 1755.279 kb on - strand at 1755.289 kb on - strand at 1755.394 kb on + strand at 1755.463 kb on - strand, within OLJFJH_08570 at 1755.831 kb on + strand, within OLJFJH_08570 at 1755.832 kb on - strand, within OLJFJH_08570 at 1755.832 kb on - strand, within OLJFJH_08570 at 1755.832 kb on - strand, within OLJFJH_08570 at 1755.835 kb on + strand, within OLJFJH_08570 at 1755.835 kb on + strand, within OLJFJH_08570 at 1755.835 kb on + strand, within OLJFJH_08570 at 1755.836 kb on - strand, within OLJFJH_08570 at 1755.836 kb on - strand, within OLJFJH_08570 at 1755.836 kb on - strand, within OLJFJH_08570 at 1755.847 kb on - strand, within OLJFJH_08570 at 1755.974 kb on - strand, within OLJFJH_08570 at 1756.011 kb on - strand, within OLJFJH_08570 at 1756.011 kb on - strand, within OLJFJH_08570 at 1756.011 kb on - strand, within OLJFJH_08570 at 1756.020 kb on - strand, within OLJFJH_08570 at 1756.139 kb on - strand, within OLJFJH_08570
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:KB soft agar;Phage:cocktail;Temp:17;Samp:22-2 remove 1,753,726 + OLJFJH_08555 0.25 -1.2 1,753,956 + OLJFJH_08555 0.66 -0.6 1,753,957 - OLJFJH_08555 0.66 -1.6 1,753,957 - OLJFJH_08555 0.66 +1.3 1,753,957 - OLJFJH_08555 0.66 -1.0 1,754,095 + -1.0 1,754,095 + -0.9 1,754,195 - -0.7 1,754,200 + -0.1 1,754,201 - +0.9 1,754,201 - -0.2 1,754,201 - +0.7 1,754,201 - -0.5 1,754,251 + -0.8 1,754,252 - +0.1 1,754,297 - -1.5 1,754,790 - OLJFJH_08565 0.14 -2.7 1,754,996 - OLJFJH_08565 0.51 +0.2 1,755,078 - OLJFJH_08565 0.65 +0.8 1,755,078 - OLJFJH_08565 0.65 -3.1 1,755,200 - OLJFJH_08565 0.87 -0.6 1,755,200 - OLJFJH_08565 0.87 -0.6 1,755,202 - OLJFJH_08565 0.87 -1.1 1,755,202 - OLJFJH_08565 0.87 -1.6 1,755,279 - -0.9 1,755,289 - +0.6 1,755,394 + -0.3 1,755,463 - OLJFJH_08570 0.10 -1.2 1,755,831 + OLJFJH_08570 0.49 +0.5 1,755,832 - OLJFJH_08570 0.50 -0.5 1,755,832 - OLJFJH_08570 0.50 -0.8 1,755,832 - OLJFJH_08570 0.50 -1.1 1,755,835 + OLJFJH_08570 0.50 -0.3 1,755,835 + OLJFJH_08570 0.50 -0.2 1,755,835 + OLJFJH_08570 0.50 -3.4 1,755,836 - OLJFJH_08570 0.50 -0.4 1,755,836 - OLJFJH_08570 0.50 -0.1 1,755,836 - OLJFJH_08570 0.50 -1.4 1,755,847 - OLJFJH_08570 0.51 +0.0 1,755,974 - OLJFJH_08570 0.65 -0.4 1,756,011 - OLJFJH_08570 0.68 -1.5 1,756,011 - OLJFJH_08570 0.68 -2.1 1,756,011 - OLJFJH_08570 0.68 -0.5 1,756,020 - OLJFJH_08570 0.69 -2.3 1,756,139 - OLJFJH_08570 0.82 -0.9
Or see this region's nucleotide sequence