Strain Fitness in Erwinia amylovora T8 around OLJFJH_06430

Experiment: Matrix:KB soft agar;Phage:cocktail;Temp:17;Samp:22-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:KB soft agar;Phage:cocktail;Temp:17;Samp:22-2
1,299,900	+		OLJFJH_06425	0.69	+0.8
1,299,900	+		OLJFJH_06425	0.69	-0.5
1,299,900	+		OLJFJH_06425	0.69	-0.9
1,299,900	+		OLJFJH_06425	0.69	-1.2
1,299,900	+		OLJFJH_06425	0.69	-0.3
1,299,901	-		OLJFJH_06425	0.69	-1.7
1,299,901	-		OLJFJH_06425	0.69	-0.7
1,299,901	-		OLJFJH_06425	0.69	-1.0
1,299,981	+		OLJFJH_06425	0.72	-0.7
1,299,982	-		OLJFJH_06425	0.72	+6.0
1,300,218	+		OLJFJH_06425	0.83	+0.1
1,300,218	+		OLJFJH_06425	0.83	+0.6
1,300,218	+		OLJFJH_06425	0.83	-1.0
1,300,218	+		OLJFJH_06425	0.83	-1.6
1,300,218	+		OLJFJH_06425	0.83	+0.6
1,300,219	-		OLJFJH_06425	0.83	-0.8
1,300,219	-		OLJFJH_06425	0.83	+0.8
1,300,260	+		OLJFJH_06425	0.85	+0.2
1,300,431	-				+0.9
1,300,542	-				-0.5
1,300,560	+				-1.9
1,300,653	+				-0.4
1,300,654	-				-1.9
1,300,692	-				-3.4
1,300,695	+				-1.4
1,300,696	-				-0.6
1,300,722	+				-0.9
1,300,722	+				+0.1
1,300,722	+				-0.6
1,300,723	-				-0.8
1,300,723	-				-1.2
1,300,778	+				-0.1
1,300,778	+				-0.3
1,300,779	-				-0.2
1,300,779	-				-0.7
1,300,876	+				-2.3
1,300,882	+				-0.7
1,300,882	+				-0.7
1,300,882	+				+0.1
1,300,882	+				-0.2
1,300,883	-				-0.5
1,300,887	+				-0.2
1,300,887	+				+1.2
1,300,898	-				-1.0
1,300,898	-				-1.1
1,301,130	-		OLJFJH_06430	0.26	-1.1
1,301,174	-		OLJFJH_06430	0.30	-2.0
1,301,196	-		OLJFJH_06430	0.33	+0.1
1,301,197	+		OLJFJH_06430	0.33	-1.3
1,301,197	+		OLJFJH_06430	0.33	-0.7
1,301,198	-		OLJFJH_06430	0.33	-2.5
1,301,279	+		OLJFJH_06430	0.41	-0.6
1,301,280	-		OLJFJH_06430	0.41	-0.1
1,301,455	-		OLJFJH_06430	0.60	-0.6
1,301,499	+		OLJFJH_06430	0.64	-1.5
1,301,500	-		OLJFJH_06430	0.64	-0.2
1,301,504	-		OLJFJH_06430	0.65	-1.9
1,301,504	-		OLJFJH_06430	0.65	+0.1
1,301,504	-		OLJFJH_06430	0.65	-1.3
1,301,557	+		OLJFJH_06430	0.70	-1.7
1,301,717	+		OLJFJH_06430	0.87	-0.7
1,301,738	-		OLJFJH_06430	0.89	-1.2
1,301,810	+				-1.0
1,301,811	-				+0.1
1,301,811	-				-0.5
1,301,817	-				-0.2
1,301,821	+				-0.5
1,301,822	-				+2.6
1,301,841	-				+1.8
1,301,875	+				-0.5
1,301,875	+				+2.3
1,301,876	-				+0.3
1,301,876	-				-0.4
1,301,897	+				-0.6
1,301,897	+				-0.3
1,301,898	-				+0.4
1,301,898	-				+1.5
1,301,898	-				-0.7
1,301,898	-				-0.2
1,301,898	-				-1.1
1,301,898	-				-0.1
1,301,898	-				+1.6
1,301,898	-				-0.4
1,301,901	+				-0.5
1,301,901	+				+0.6
1,301,902	-				+0.5
1,301,902	-				+0.6
1,301,902	-				-0.7
1,302,007	+		OLJFJH_06435	0.31	-2.7
1,302,008	-		OLJFJH_06435	0.31	+0.3
1,302,068	-		OLJFJH_06435	0.44	+0.2
1,302,068	-		OLJFJH_06435	0.44	+0.1
1,302,257	+		OLJFJH_06435	0.84	-0.7
1,302,258	-		OLJFJH_06435	0.84	-0.8
1,302,267	-		OLJFJH_06435	0.86	-0.9
1,302,267	-		OLJFJH_06435	0.86	+0.4
1,302,271	+		OLJFJH_06435	0.87	-2.3
1,302,272	-		OLJFJH_06435	0.87	+1.5
1,302,315	+				+1.0
1,302,315	+				+0.6
1,302,315	+				-0.3
1,302,316	-				-0.1
1,302,380	-				+2.1
1,302,385	+				-0.4
1,302,385	+				+0.9
1,302,406	+				+0.2
1,302,437	+				+1.9
1,302,437	+				+0.9
1,302,437	+				-0.3
1,302,438	-				+0.6
1,302,438	-				+0.5
1,302,438	-				-1.3
1,302,438	-				+0.1
1,302,455	+				-0.2
1,302,554	+				+0.6
1,302,558	-				-0.1
1,302,675	+		OLJFJH_06440	0.19	-2.0
1,302,675	+		OLJFJH_06440	0.19	-0.1
1,302,676	-		OLJFJH_06440	0.19	-1.0
1,302,679	+		OLJFJH_06440	0.20	-0.9
1,302,680	-		OLJFJH_06440	0.20	-0.1
1,302,680	-		OLJFJH_06440	0.20	-1.6
1,302,680	-		OLJFJH_06440	0.20	-0.4
1,302,680	-		OLJFJH_06440	0.20	+0.7
1,302,680	-		OLJFJH_06440	0.20	-1.4
1,302,688	+		OLJFJH_06440	0.21	-0.8
1,302,688	+		OLJFJH_06440	0.21	-0.8
1,302,689	-		OLJFJH_06440	0.21	-0.5
1,302,689	-		OLJFJH_06440	0.21	+0.2
1,302,689	-		OLJFJH_06440	0.21	+0.7
1,302,691	-		OLJFJH_06440	0.21	+0.1
1,302,691	-		OLJFJH_06440	0.21	-0.9
1,302,730	+		OLJFJH_06440	0.26	-0.6
1,302,731	-		OLJFJH_06440	0.26	-0.1
1,302,750	+		OLJFJH_06440	0.28	-1.7
1,302,751	-		OLJFJH_06440	0.28	-0.0
1,302,838	+		OLJFJH_06440	0.38	-1.0
1,302,838	+		OLJFJH_06440	0.38	+1.0
1,302,838	+		OLJFJH_06440	0.38	+1.6
1,302,839	-		OLJFJH_06440	0.38	+0.5