Experiment: Matrix:KB soft agar;Phage:cocktail;Temp:17;Samp:22-2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_04135 and OLJFJH_04140 are separated by 153 nucleotides OLJFJH_04140 and OLJFJH_04145 are separated by 22 nucleotides OLJFJH_04145 and OLJFJH_04150 are separated by 367 nucleotides
OLJFJH_04135: OLJFJH_04135 - Intracellular growth attenuator protein igaA, at 786,528 to 788,666
_04135
OLJFJH_04140: OLJFJH_04140 - ribosome-associated heat shock protein Hsp15, at 788,820 to 789,221
_04140
OLJFJH_04145: OLJFJH_04145 - Hsp33 family molecular chaperone HslO, at 789,244 to 790,122
_04145
OLJFJH_04150: OLJFJH_04150 - phosphoenolpyruvate carboxykinase (ATP), at 790,490 to 792,109
_04150
Position (kb) 789
790
791 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 788.621 kb on + strand at 788.788 kb on + strand at 788.788 kb on + strand at 788.789 kb on - strand at 788.789 kb on - strand at 788.789 kb on - strand at 788.789 kb on - strand at 788.792 kb on + strand at 788.792 kb on + strand at 788.792 kb on + strand at 788.792 kb on + strand at 788.792 kb on + strand at 788.792 kb on + strand at 788.793 kb on - strand at 788.793 kb on - strand at 788.793 kb on - strand at 788.855 kb on + strand at 788.855 kb on + strand at 788.856 kb on - strand at 788.856 kb on - strand at 788.856 kb on - strand at 788.931 kb on + strand, within OLJFJH_04140 at 788.931 kb on + strand, within OLJFJH_04140 at 788.932 kb on - strand, within OLJFJH_04140 at 788.932 kb on - strand, within OLJFJH_04140 at 788.932 kb on - strand, within OLJFJH_04140 at 788.932 kb on - strand, within OLJFJH_04140 at 788.932 kb on - strand, within OLJFJH_04140 at 788.932 kb on - strand, within OLJFJH_04140 at 788.957 kb on + strand, within OLJFJH_04140 at 789.011 kb on + strand, within OLJFJH_04140 at 789.204 kb on + strand at 789.204 kb on + strand at 789.227 kb on + strand at 789.243 kb on + strand at 789.243 kb on + strand at 789.244 kb on - strand at 789.293 kb on + strand at 789.407 kb on + strand, within OLJFJH_04145 at 789.438 kb on + strand, within OLJFJH_04145 at 789.449 kb on + strand, within OLJFJH_04145 at 789.450 kb on - strand, within OLJFJH_04145 at 789.670 kb on + strand, within OLJFJH_04145 at 789.670 kb on + strand, within OLJFJH_04145 at 789.676 kb on - strand, within OLJFJH_04145 at 789.764 kb on + strand, within OLJFJH_04145 at 789.764 kb on + strand, within OLJFJH_04145 at 789.764 kb on + strand, within OLJFJH_04145 at 789.764 kb on + strand, within OLJFJH_04145 at 789.881 kb on - strand, within OLJFJH_04145 at 789.934 kb on - strand, within OLJFJH_04145 at 789.934 kb on - strand, within OLJFJH_04145 at 789.934 kb on - strand, within OLJFJH_04145 at 789.934 kb on - strand, within OLJFJH_04145 at 789.989 kb on + strand, within OLJFJH_04145 at 789.990 kb on - strand, within OLJFJH_04145 at 790.036 kb on + strand at 790.036 kb on + strand at 790.048 kb on - strand at 790.048 kb on - strand at 790.051 kb on + strand at 790.051 kb on + strand at 790.051 kb on + strand at 790.052 kb on - strand at 790.052 kb on - strand at 790.052 kb on - strand at 790.052 kb on - strand at 790.057 kb on + strand at 790.058 kb on - strand at 790.058 kb on - strand at 790.142 kb on + strand at 790.142 kb on + strand at 790.142 kb on + strand at 790.142 kb on + strand at 790.143 kb on - strand at 790.143 kb on - strand at 790.143 kb on - strand at 790.152 kb on + strand at 790.152 kb on + strand at 790.152 kb on + strand at 790.152 kb on + strand at 790.152 kb on + strand at 790.153 kb on - strand at 790.153 kb on - strand at 790.272 kb on + strand at 790.373 kb on + strand at 790.373 kb on + strand at 790.373 kb on + strand at 790.373 kb on + strand at 790.374 kb on - strand at 790.374 kb on - strand at 790.374 kb on - strand at 790.374 kb on - strand at 790.375 kb on + strand at 790.375 kb on + strand at 790.376 kb on - strand at 790.393 kb on - strand at 790.407 kb on + strand at 790.407 kb on + strand at 790.431 kb on + strand at 790.432 kb on - strand at 790.440 kb on + strand at 790.440 kb on + strand at 790.441 kb on - strand at 790.441 kb on - strand at 790.441 kb on - strand at 790.455 kb on + strand at 790.462 kb on + strand at 790.487 kb on - strand at 790.487 kb on - strand at 790.487 kb on - strand at 790.499 kb on - strand at 790.562 kb on - strand at 790.562 kb on - strand at 790.693 kb on + strand, within OLJFJH_04150 at 790.697 kb on + strand, within OLJFJH_04150 at 790.698 kb on - strand, within OLJFJH_04150 at 790.698 kb on - strand, within OLJFJH_04150 at 790.898 kb on - strand, within OLJFJH_04150 at 790.898 kb on - strand, within OLJFJH_04150
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:KB soft agar;Phage:cocktail;Temp:17;Samp:22-2 remove 788,621 + +0.3 788,788 + +0.4 788,788 + -1.1 788,789 - -0.4 788,789 - -0.8 788,789 - -3.0 788,789 - -1.7 788,792 + -0.0 788,792 + +0.5 788,792 + -0.7 788,792 + -1.3 788,792 + +0.1 788,792 + -1.3 788,793 - -1.7 788,793 - +0.8 788,793 - -0.4 788,855 + +0.5 788,855 + -0.5 788,856 - -1.7 788,856 - -0.9 788,856 - -2.0 788,931 + OLJFJH_04140 0.28 +0.3 788,931 + OLJFJH_04140 0.28 -0.9 788,932 - OLJFJH_04140 0.28 +0.9 788,932 - OLJFJH_04140 0.28 -2.6 788,932 - OLJFJH_04140 0.28 +0.2 788,932 - OLJFJH_04140 0.28 -1.5 788,932 - OLJFJH_04140 0.28 -2.7 788,932 - OLJFJH_04140 0.28 -0.7 788,957 + OLJFJH_04140 0.34 -0.7 789,011 + OLJFJH_04140 0.48 +0.0 789,204 + -1.3 789,204 + -1.1 789,227 + -0.8 789,243 + -1.3 789,243 + -1.3 789,244 - -0.6 789,293 + -1.2 789,407 + OLJFJH_04145 0.19 +0.5 789,438 + OLJFJH_04145 0.22 -3.3 789,449 + OLJFJH_04145 0.23 -2.1 789,450 - OLJFJH_04145 0.23 -1.5 789,670 + OLJFJH_04145 0.48 -0.9 789,670 + OLJFJH_04145 0.48 -2.5 789,676 - OLJFJH_04145 0.49 -2.2 789,764 + OLJFJH_04145 0.59 -0.4 789,764 + OLJFJH_04145 0.59 -2.8 789,764 + OLJFJH_04145 0.59 -0.8 789,764 + OLJFJH_04145 0.59 -2.1 789,881 - OLJFJH_04145 0.72 -2.3 789,934 - OLJFJH_04145 0.78 -0.8 789,934 - OLJFJH_04145 0.78 -0.2 789,934 - OLJFJH_04145 0.78 -1.2 789,934 - OLJFJH_04145 0.78 -2.4 789,989 + OLJFJH_04145 0.85 -0.8 789,990 - OLJFJH_04145 0.85 -1.5 790,036 + -1.9 790,036 + -0.2 790,048 - -1.6 790,048 - -0.4 790,051 + +1.0 790,051 + +0.4 790,051 + -0.4 790,052 - +0.9 790,052 - +0.5 790,052 - -0.7 790,052 - -0.1 790,057 + -0.5 790,058 - -1.5 790,058 - -0.4 790,142 + -0.4 790,142 + -1.7 790,142 + -0.9 790,142 + +0.6 790,143 - -3.6 790,143 - -2.6 790,143 - +0.7 790,152 + -0.7 790,152 + -0.8 790,152 + +0.0 790,152 + -0.3 790,152 + -1.5 790,153 - +1.2 790,153 - +0.0 790,272 + +1.5 790,373 + -0.6 790,373 + +0.2 790,373 + +0.6 790,373 + +0.6 790,374 - +0.8 790,374 - +0.6 790,374 - +0.3 790,374 - -0.5 790,375 + -1.4 790,375 + +1.4 790,376 - +1.5 790,393 - -0.6 790,407 + -0.3 790,407 + +0.6 790,431 + +0.4 790,432 - +0.8 790,440 + +0.2 790,440 + +1.0 790,441 - -0.3 790,441 - +1.2 790,441 - +1.9 790,455 + +0.7 790,462 + +0.9 790,487 - +1.3 790,487 - -0.1 790,487 - -0.9 790,499 - +0.7 790,562 - +2.4 790,562 - +1.0 790,693 + OLJFJH_04150 0.13 +1.0 790,697 + OLJFJH_04150 0.13 +1.0 790,698 - OLJFJH_04150 0.13 +0.2 790,698 - OLJFJH_04150 0.13 +1.4 790,898 - OLJFJH_04150 0.25 -0.8 790,898 - OLJFJH_04150 0.25 +0.7
Or see this region's nucleotide sequence