Experiment: Matrix:KB soft agar;Phage:cocktail;Temp:17;Samp:22-2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_01910 and OLJFJH_01915 are separated by 14 nucleotides OLJFJH_01915 and OLJFJH_01920 overlap by 38 nucleotides OLJFJH_01920 and OLJFJH_01925 are separated by 172 nucleotides
OLJFJH_01910: OLJFJH_01910 - pyrimidine 5'-nucleotidase, at 340,228 to 340,908
_01910
OLJFJH_01915: OLJFJH_01915 - ribosomal protein S18-alanine N-acetyltransferase, at 340,923 to 341,363
_01915
OLJFJH_01920: OLJFJH_01920 - DNA polymerase III subunit psi, at 341,326 to 341,745
_01920
OLJFJH_01925: OLJFJH_01925 - 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC, at 341,918 to 342,946
_01925
Position (kb) 340
341
342 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 340.115 kb on - strand at 340.140 kb on - strand at 340.240 kb on + strand at 340.312 kb on - strand, within OLJFJH_01910 at 340.390 kb on + strand, within OLJFJH_01910 at 340.430 kb on + strand, within OLJFJH_01910 at 340.477 kb on + strand, within OLJFJH_01910 at 340.478 kb on - strand, within OLJFJH_01910 at 340.496 kb on + strand, within OLJFJH_01910 at 340.557 kb on + strand, within OLJFJH_01910 at 340.570 kb on - strand, within OLJFJH_01910 at 340.778 kb on + strand, within OLJFJH_01910 at 340.787 kb on + strand, within OLJFJH_01910 at 340.814 kb on + strand, within OLJFJH_01910 at 340.883 kb on - strand at 340.943 kb on + strand at 340.943 kb on + strand at 340.943 kb on + strand at 340.943 kb on + strand at 340.944 kb on - strand at 340.979 kb on - strand, within OLJFJH_01915 at 341.021 kb on - strand, within OLJFJH_01915 at 341.021 kb on - strand, within OLJFJH_01915 at 341.088 kb on - strand, within OLJFJH_01915 at 341.088 kb on - strand, within OLJFJH_01915 at 341.088 kb on - strand, within OLJFJH_01915 at 341.099 kb on + strand, within OLJFJH_01915 at 341.100 kb on - strand, within OLJFJH_01915 at 341.246 kb on - strand, within OLJFJH_01915 at 341.835 kb on - strand at 341.845 kb on + strand at 341.845 kb on + strand at 341.846 kb on - strand at 341.846 kb on - strand at 341.846 kb on - strand at 341.846 kb on - strand at 341.846 kb on - strand at 341.867 kb on - strand at 341.884 kb on + strand at 341.884 kb on + strand at 341.884 kb on + strand at 341.884 kb on + strand at 341.884 kb on + strand at 341.884 kb on + strand at 341.884 kb on + strand at 341.885 kb on - strand at 341.885 kb on - strand at 341.930 kb on - strand at 341.949 kb on + strand at 342.062 kb on + strand, within OLJFJH_01925 at 342.161 kb on + strand, within OLJFJH_01925 at 342.178 kb on + strand, within OLJFJH_01925 at 342.344 kb on + strand, within OLJFJH_01925 at 342.345 kb on - strand, within OLJFJH_01925 at 342.345 kb on - strand, within OLJFJH_01925
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:KB soft agar;Phage:cocktail;Temp:17;Samp:22-2 remove 340,115 - +0.1 340,140 - -0.3 340,240 + -0.7 340,312 - OLJFJH_01910 0.12 -0.7 340,390 + OLJFJH_01910 0.24 -0.2 340,430 + OLJFJH_01910 0.30 +0.7 340,477 + OLJFJH_01910 0.37 +0.1 340,478 - OLJFJH_01910 0.37 +0.1 340,496 + OLJFJH_01910 0.39 -0.3 340,557 + OLJFJH_01910 0.48 -0.4 340,570 - OLJFJH_01910 0.50 -1.0 340,778 + OLJFJH_01910 0.81 +1.5 340,787 + OLJFJH_01910 0.82 +0.9 340,814 + OLJFJH_01910 0.86 +0.4 340,883 - -0.6 340,943 + -1.7 340,943 + -0.7 340,943 + -3.3 340,943 + -1.8 340,944 - -2.5 340,979 - OLJFJH_01915 0.13 -0.0 341,021 - OLJFJH_01915 0.22 +0.1 341,021 - OLJFJH_01915 0.22 -3.1 341,088 - OLJFJH_01915 0.37 -1.3 341,088 - OLJFJH_01915 0.37 -3.7 341,088 - OLJFJH_01915 0.37 +0.9 341,099 + OLJFJH_01915 0.40 -3.1 341,100 - OLJFJH_01915 0.40 +0.1 341,246 - OLJFJH_01915 0.73 -3.1 341,835 - -0.7 341,845 + -2.2 341,845 + -4.2 341,846 - -1.2 341,846 - -0.9 341,846 - +1.3 341,846 - -1.4 341,846 - -0.6 341,867 - -1.2 341,884 + -0.6 341,884 + -0.2 341,884 + +0.0 341,884 + -1.2 341,884 + +0.1 341,884 + -2.2 341,884 + -0.1 341,885 - +1.1 341,885 - -0.9 341,930 - -2.7 341,949 + +1.7 342,062 + OLJFJH_01925 0.14 +0.4 342,161 + OLJFJH_01925 0.24 -1.4 342,178 + OLJFJH_01925 0.25 -1.1 342,344 + OLJFJH_01925 0.41 -1.8 342,345 - OLJFJH_01925 0.41 -3.4 342,345 - OLJFJH_01925 0.41 -1.6
Or see this region's nucleotide sequence