Strain Fitness in Pseudomonas sp. RS175 around PFR28_02339

Experiment: D-Trehalose (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose (C) 5 mM
2,792,493	-				-0.7
2,792,498	-				-2.4
2,792,533	+				-0.2
2,792,534	-				-0.6
2,792,660	+		PFR28_02338	0.15	-0.3
2,793,023	+		PFR28_02338	0.54	-1.6
2,793,023	+		PFR28_02338	0.54	-1.8
2,793,023	+		PFR28_02338	0.54	-1.4
2,793,023	+		PFR28_02338	0.54	+0.7
2,793,024	-		PFR28_02338	0.54	+0.9
2,793,024	-		PFR28_02338	0.54	+0.3
2,793,024	-		PFR28_02338	0.54	-0.4
2,793,263	+		PFR28_02338	0.79	+0.3
2,793,263	+		PFR28_02338	0.79	-1.1
2,793,263	+		PFR28_02338	0.79	+1.6
2,793,264	-		PFR28_02338	0.79	-0.3
2,793,314	+		PFR28_02338	0.85	-1.4
2,793,315	-		PFR28_02338	0.85	+1.9
2,793,315	-		PFR28_02338	0.85	-1.4
2,793,497	-				-0.7
2,793,601	+		PFR28_02339	0.23	+0.6
2,793,601	+		PFR28_02339	0.23	+0.5
2,793,727	+		PFR28_02339	0.46	-0.5
2,793,728	-		PFR28_02339	0.46	+2.2
2,793,728	-		PFR28_02339	0.46	+1.4
2,793,728	-		PFR28_02339	0.46	+0.4
2,793,736	+		PFR28_02339	0.48	-0.4
2,793,737	-		PFR28_02339	0.48	-1.3
2,793,740	+		PFR28_02339	0.49	+0.6
2,793,741	-		PFR28_02339	0.49	+0.4
2,793,741	-		PFR28_02339	0.49	-1.3
2,793,741	-		PFR28_02339	0.49	-1.0
2,793,741	-		PFR28_02339	0.49	+0.7
2,793,845	-		PFR28_02339	0.68	-0.7
2,793,880	+		PFR28_02339	0.75	-1.4
2,793,881	-		PFR28_02339	0.75	+0.9
2,793,881	-		PFR28_02339	0.75	-1.1
2,793,881	-		PFR28_02339	0.75	-0.4
2,793,881	-		PFR28_02339	0.75	-0.3
2,793,997	+				-1.0
2,793,997	+				-2.1
2,794,068	-				-2.1
2,794,127	+				-1.8
2,794,127	+				-0.8
2,794,127	+				-1.5
2,794,128	-				-2.8
2,794,128	-				-1.5
2,794,128	-				-2.5
2,794,199	+		PFR28_02340	0.10	-2.0
2,794,433	+		PFR28_02340	0.24	-4.5
2,794,433	+		PFR28_02340	0.24	-0.3
2,794,493	+		PFR28_02340	0.28	-2.7
2,794,493	+		PFR28_02340	0.28	-2.1
2,794,493	+		PFR28_02340	0.28	+0.6
2,794,502	+		PFR28_02340	0.29	-2.7
2,794,502	+		PFR28_02340	0.29	-4.7
2,794,502	+		PFR28_02340	0.29	-0.9
2,794,502	+		PFR28_02340	0.29	-3.5
2,794,503	-		PFR28_02340	0.29	-4.0
2,794,503	-		PFR28_02340	0.29	-2.3
2,794,503	-		PFR28_02340	0.29	-2.0
2,794,503	-		PFR28_02340	0.29	-2.5
2,794,503	-		PFR28_02340	0.29	-2.6
2,794,503	-		PFR28_02340	0.29	-1.1
2,794,503	-		PFR28_02340	0.29	-2.0
2,794,505	+		PFR28_02340	0.29	-2.7
2,794,506	-		PFR28_02340	0.29	-3.3
2,794,572	-		PFR28_02340	0.33	-0.4
2,794,572	-		PFR28_02340	0.33	-4.1
2,794,572	-		PFR28_02340	0.33	-2.0
2,794,638	-		PFR28_02340	0.37	-3.0
2,794,638	-		PFR28_02340	0.37	-2.0
2,794,856	+		PFR28_02340	0.50	-1.0
2,794,943	+		PFR28_02340	0.56	-1.3
2,794,944	-		PFR28_02340	0.56	-3.1
2,794,950	-		PFR28_02340	0.56	-2.8
2,795,001	+		PFR28_02340	0.59	-1.6