Strain Fitness in Erwinia amylovora T8 around OLJFJH_10560

Experiment: Matrix:KB soft agar;Phage:inactivated cocktail;Temp:17;Samp:23-7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:KB soft agar;Phage:inactivated cocktail;Temp:17;Samp:23-7
2,182,415	-		OLJFJH_10550	0.89	-0.5
2,182,415	-		OLJFJH_10550	0.89	+0.9
2,182,415	-		OLJFJH_10550	0.89	-0.3
2,182,444	+		OLJFJH_10550	0.90	+0.4
2,182,445	-		OLJFJH_10550	0.90	-0.7
2,182,445	-		OLJFJH_10550	0.90	-1.2
2,182,448	-				-0.3
2,182,478	-				-0.5
2,182,766	-		OLJFJH_10555	0.16	-1.5
2,182,793	-		OLJFJH_10555	0.21	+0.4
2,182,793	-		OLJFJH_10555	0.21	+0.7
2,182,793	-		OLJFJH_10555	0.21	+0.8
2,182,799	+		OLJFJH_10555	0.22	+0.1
2,182,800	-		OLJFJH_10555	0.22	+0.9
2,182,815	-		OLJFJH_10555	0.24	+0.3
2,182,847	-		OLJFJH_10555	0.29	-0.3
2,182,862	+		OLJFJH_10555	0.32	-0.3
2,182,863	-		OLJFJH_10555	0.32	+0.4
2,182,882	+		OLJFJH_10555	0.35	-0.6
2,182,882	+		OLJFJH_10555	0.35	+0.4
2,182,882	+		OLJFJH_10555	0.35	+0.2
2,182,883	-		OLJFJH_10555	0.35	+0.1
2,182,883	-		OLJFJH_10555	0.35	-0.7
2,182,883	-		OLJFJH_10555	0.35	-0.3
2,182,979	+		OLJFJH_10555	0.50	+0.0
2,182,980	-		OLJFJH_10555	0.50	+0.4
2,182,980	-		OLJFJH_10555	0.50	-0.7
2,182,980	-		OLJFJH_10555	0.50	-0.3
2,182,981	+		OLJFJH_10555	0.50	-0.3
2,182,981	+		OLJFJH_10555	0.50	+0.3
2,182,982	-		OLJFJH_10555	0.51	+0.7
2,182,982	-		OLJFJH_10555	0.51	-0.1
2,182,982	-		OLJFJH_10555	0.51	+0.3
2,183,003	+		OLJFJH_10555	0.54	+0.6
2,183,054	+		OLJFJH_10555	0.62	+0.2
2,183,087	+		OLJFJH_10555	0.67	-1.2
2,183,091	-		OLJFJH_10555	0.68	-1.6
2,183,124	-		OLJFJH_10555	0.73	+0.9
2,183,183	+		OLJFJH_10555	0.82	-1.2
2,183,184	-		OLJFJH_10555	0.82	+0.3
2,183,368	+				-1.3
2,183,470	-				-1.1
2,183,488	+				-0.8
2,183,516	+				-1.2
2,183,531	-				-0.6
2,183,577	-		OLJFJH_10560	0.12	-1.5
2,183,652	-		OLJFJH_10560	0.17	-1.1
2,183,658	+		OLJFJH_10560	0.18	+0.2
2,183,664	+		OLJFJH_10560	0.18	-1.3
2,183,720	+		OLJFJH_10560	0.22	-0.3
2,183,751	-		OLJFJH_10560	0.24	-1.7
2,183,753	-		OLJFJH_10560	0.24	-0.5
2,183,753	-		OLJFJH_10560	0.24	-1.4
2,183,881	+		OLJFJH_10560	0.32	+1.5
2,183,881	+		OLJFJH_10560	0.32	-0.3
2,183,935	+		OLJFJH_10560	0.36	-0.1
2,184,004	+		OLJFJH_10560	0.40	-0.7
2,184,005	-		OLJFJH_10560	0.40	-0.3
2,184,005	-		OLJFJH_10560	0.40	-0.9
2,184,005	-		OLJFJH_10560	0.40	-0.7
2,184,155	+		OLJFJH_10560	0.50	-0.2
2,184,156	-		OLJFJH_10560	0.50	-0.3
2,184,175	+		OLJFJH_10560	0.52	+0.4
2,184,176	-		OLJFJH_10560	0.52	-1.3
2,184,176	-		OLJFJH_10560	0.52	+0.2
2,184,176	-		OLJFJH_10560	0.52	-1.2
2,184,210	-		OLJFJH_10560	0.54	-1.3
2,184,210	-		OLJFJH_10560	0.54	+0.3
2,184,298	+		OLJFJH_10560	0.60	-1.3
2,184,385	+		OLJFJH_10560	0.65	-1.1
2,184,386	-		OLJFJH_10560	0.65	-1.8
2,184,656	+		OLJFJH_10560	0.83	-1.9
2,184,777	+				-1.2
2,184,777	+				-0.8
2,184,915	-				-0.1
2,184,945	-				+0.9
2,184,948	+				+0.8
2,184,955	-				+2.7
2,184,999	-				+0.4
2,184,999	-				+0.6
2,185,022	-				+0.1
2,185,124	-				-0.8
2,185,128	+		OLJFJH_10565	0.10	-2.0
2,185,199	-		OLJFJH_10565	0.14	+0.4
2,185,200	+		OLJFJH_10565	0.14	+0.4
2,185,200	+		OLJFJH_10565	0.14	-0.0
2,185,201	-		OLJFJH_10565	0.14	-1.3
2,185,201	-		OLJFJH_10565	0.14	+0.7
2,185,201	-		OLJFJH_10565	0.14	-0.0
2,185,201	-		OLJFJH_10565	0.14	+1.0
2,185,252	+		OLJFJH_10565	0.16	+1.1
2,185,252	+		OLJFJH_10565	0.16	+0.7
2,185,316	-		OLJFJH_10565	0.19	+1.2
2,185,349	+		OLJFJH_10565	0.21	+0.5
2,185,433	+		OLJFJH_10565	0.25	-0.0
2,185,434	-		OLJFJH_10565	0.25	+0.2
2,185,443	+		OLJFJH_10565	0.25	+0.4
2,185,444	-		OLJFJH_10565	0.25	+1.1
2,185,522	+		OLJFJH_10565	0.29	-0.0
2,185,523	-		OLJFJH_10565	0.29	-0.7