Experiment: Matrix:KB soft agar;Phage:inactivated cocktail;Temp:17;Samp:23-7
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_08610 and OLJFJH_08615 are separated by 280 nucleotides OLJFJH_08615 and OLJFJH_08620 overlap by 4 nucleotides OLJFJH_08620 and OLJFJH_08625 are separated by 521 nucleotides
OLJFJH_08610: OLJFJH_08610 - agmatinase, at 1,765,528 to 1,766,451
_08610
OLJFJH_08615: OLJFJH_08615 - putative double-glycine leader peptidase C39-like (CLD) domain, at 1,766,732 to 1,767,100
_08615
OLJFJH_08620: OLJFJH_08620 - hypothetical protein, at 1,767,097 to 1,767,417
_08620
OLJFJH_08625: OLJFJH_08625 - hypothetical protein, at 1,767,939 to 1,768,382
_08625
Position (kb) 1766
1767
1768 Strain fitness (log2 ratio) -2
-1
0
1 at 1765.808 kb on - strand, within OLJFJH_08610 at 1765.909 kb on + strand, within OLJFJH_08610 at 1765.909 kb on + strand, within OLJFJH_08610 at 1765.909 kb on + strand, within OLJFJH_08610 at 1765.910 kb on - strand, within OLJFJH_08610 at 1765.953 kb on + strand, within OLJFJH_08610 at 1765.983 kb on + strand, within OLJFJH_08610 at 1765.989 kb on + strand, within OLJFJH_08610 at 1766.032 kb on + strand, within OLJFJH_08610 at 1766.206 kb on + strand, within OLJFJH_08610 at 1766.415 kb on + strand at 1766.422 kb on + strand at 1766.423 kb on - strand at 1766.423 kb on - strand at 1766.516 kb on - strand at 1766.977 kb on + strand, within OLJFJH_08615 at 1767.074 kb on + strand at 1767.397 kb on + strand at 1767.483 kb on + strand at 1767.594 kb on - strand at 1767.637 kb on + strand at 1767.787 kb on + strand at 1767.804 kb on - strand at 1767.878 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:KB soft agar;Phage:inactivated cocktail;Temp:17;Samp:23-7 remove 1,765,808 - OLJFJH_08610 0.30 -0.8 1,765,909 + OLJFJH_08610 0.41 -0.7 1,765,909 + OLJFJH_08610 0.41 -0.1 1,765,909 + OLJFJH_08610 0.41 -1.1 1,765,910 - OLJFJH_08610 0.41 -1.1 1,765,953 + OLJFJH_08610 0.46 -0.4 1,765,983 + OLJFJH_08610 0.49 +0.1 1,765,989 + OLJFJH_08610 0.50 -1.1 1,766,032 + OLJFJH_08610 0.55 -1.0 1,766,206 + OLJFJH_08610 0.73 -0.1 1,766,415 + -0.7 1,766,422 + -0.7 1,766,423 - -1.1 1,766,423 - -1.9 1,766,516 - -0.9 1,766,977 + OLJFJH_08615 0.66 -1.1 1,767,074 + +0.3 1,767,397 + -0.4 1,767,483 + -0.4 1,767,594 - -0.3 1,767,637 + +0.8 1,767,787 + -0.3 1,767,804 - +1.4 1,767,878 + -0.3
Or see this region's nucleotide sequence