Experiment: Matrix:KB soft agar;Phage:inactivated cocktail;Temp:17;Samp:23-7
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_05715 and OLJFJH_05720 are separated by 291 nucleotides OLJFJH_05720 and OLJFJH_05725 are separated by 43 nucleotides OLJFJH_05725 and OLJFJH_05730 are separated by 97 nucleotides OLJFJH_05730 and OLJFJH_05735 overlap by 15 nucleotides OLJFJH_05735 and OLJFJH_05740 are separated by 68 nucleotides
OLJFJH_05715: OLJFJH_05715 - DUF3800 domain-containing protein, at 1,160,056 to 1,160,787
_05715
OLJFJH_05720: OLJFJH_05720 - hypothetical protein, at 1,161,079 to 1,161,216
_05720
OLJFJH_05725: OLJFJH_05725 - DUF6387 domain-containing protein, at 1,161,260 to 1,162,111
_05725
OLJFJH_05730: OLJFJH_05730 - hypothetical protein, at 1,162,209 to 1,162,739
_05730
OLJFJH_05735: OLJFJH_05735 - hypothetical protein, at 1,162,725 to 1,162,919
_05735
OLJFJH_05740: OLJFJH_05740 - Tyr recombinase domain-containing protein, at 1,162,988 to 1,163,716
_05740
Position (kb) 1161
1162
1163 Strain fitness (log2 ratio) -1
0
1 at 1160.827 kb on + strand at 1161.046 kb on - strand at 1161.058 kb on - strand at 1161.397 kb on + strand, within OLJFJH_05725 at 1161.403 kb on - strand, within OLJFJH_05725 at 1161.441 kb on + strand, within OLJFJH_05725 at 1161.441 kb on + strand, within OLJFJH_05725 at 1161.476 kb on + strand, within OLJFJH_05725 at 1161.477 kb on - strand, within OLJFJH_05725 at 1161.498 kb on - strand, within OLJFJH_05725 at 1161.529 kb on - strand, within OLJFJH_05725 at 1161.529 kb on - strand, within OLJFJH_05725 at 1161.671 kb on + strand, within OLJFJH_05725 at 1161.680 kb on + strand, within OLJFJH_05725 at 1161.698 kb on + strand, within OLJFJH_05725 at 1161.698 kb on + strand, within OLJFJH_05725 at 1161.699 kb on - strand, within OLJFJH_05725 at 1161.779 kb on - strand, within OLJFJH_05725 at 1161.788 kb on - strand, within OLJFJH_05725 at 1161.829 kb on + strand, within OLJFJH_05725 at 1161.830 kb on - strand, within OLJFJH_05725 at 1161.830 kb on - strand, within OLJFJH_05725 at 1161.882 kb on + strand, within OLJFJH_05725 at 1161.883 kb on - strand, within OLJFJH_05725 at 1161.971 kb on - strand, within OLJFJH_05725 at 1162.146 kb on - strand at 1162.146 kb on - strand at 1162.172 kb on + strand at 1162.185 kb on - strand at 1162.193 kb on - strand at 1162.196 kb on - strand at 1162.402 kb on - strand, within OLJFJH_05730
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:KB soft agar;Phage:inactivated cocktail;Temp:17;Samp:23-7 remove 1,160,827 + +0.3 1,161,046 - -0.7 1,161,058 - -0.7 1,161,397 + OLJFJH_05725 0.16 +0.5 1,161,403 - OLJFJH_05725 0.17 +0.2 1,161,441 + OLJFJH_05725 0.21 +0.7 1,161,441 + OLJFJH_05725 0.21 -0.3 1,161,476 + OLJFJH_05725 0.25 -0.6 1,161,477 - OLJFJH_05725 0.25 -0.8 1,161,498 - OLJFJH_05725 0.28 -0.1 1,161,529 - OLJFJH_05725 0.32 -0.1 1,161,529 - OLJFJH_05725 0.32 -0.3 1,161,671 + OLJFJH_05725 0.48 -0.1 1,161,680 + OLJFJH_05725 0.49 +0.1 1,161,698 + OLJFJH_05725 0.51 +0.8 1,161,698 + OLJFJH_05725 0.51 +0.7 1,161,699 - OLJFJH_05725 0.52 -0.7 1,161,779 - OLJFJH_05725 0.61 +0.1 1,161,788 - OLJFJH_05725 0.62 -0.5 1,161,829 + OLJFJH_05725 0.67 +0.2 1,161,830 - OLJFJH_05725 0.67 +0.2 1,161,830 - OLJFJH_05725 0.67 -0.9 1,161,882 + OLJFJH_05725 0.73 -0.1 1,161,883 - OLJFJH_05725 0.73 -0.5 1,161,971 - OLJFJH_05725 0.83 +0.8 1,162,146 - +1.0 1,162,146 - +0.1 1,162,172 + -0.2 1,162,185 - +0.1 1,162,193 - +0.9 1,162,196 - +0.2 1,162,402 - OLJFJH_05730 0.36 -0.9
Or see this region's nucleotide sequence