Strain Fitness in Pseudomonas sp. RS175 around PFR28_04067

Experiment: D-Trehalose (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose (C) 5 mM
4,643,347	+		PFR28_04065	0.78	+1.1
4,643,348	-		PFR28_04065	0.78	-1.5
4,643,348	-		PFR28_04065	0.78	+0.8
4,643,348	-		PFR28_04065	0.78	-2.0
4,643,435	+				-0.3
4,643,439	+				-0.8
4,643,439	+				+1.5
4,643,439	+				-0.1
4,643,439	+				+0.5
4,643,439	+				-0.4
4,644,336	+				+0.9
4,644,336	+				+1.0
4,644,336	+				-0.3
4,644,336	+				-1.8
4,644,336	+				-0.8
4,644,336	+				+0.1
4,644,336	+				-0.5
4,644,336	+				+0.9
4,644,336	+				+0.1
4,644,336	+				-1.5
4,644,336	+				+0.7
4,644,336	+				+0.9
4,644,336	+				+0.3
4,644,336	+				+0.5
4,644,336	+				-0.1
4,644,337	-				+0.2
4,644,337	-				+1.3
4,644,337	-				+0.2
4,644,337	-				+0.7
4,644,337	-				-0.8
4,644,337	-				-0.3
4,644,337	-				+0.3
4,644,337	-				-1.1
4,644,337	-				-0.0
4,644,337	-				+0.0
4,644,337	-				+0.8
4,644,337	-				+0.5
4,644,444	-		PFR28_04067	0.32	+2.0
4,644,531	+		PFR28_04067	0.58	-0.5
4,644,532	-		PFR28_04067	0.58	+0.5
4,644,532	-		PFR28_04067	0.58	+1.3
4,644,532	-		PFR28_04067	0.58	-0.4
4,644,564	+		PFR28_04067	0.68	-1.0
4,644,565	-		PFR28_04067	0.68	-0.8
4,644,594	+		PFR28_04067	0.77	+0.2
4,644,594	+		PFR28_04067	0.77	+0.9
4,644,594	+		PFR28_04067	0.77	+0.2
4,644,595	-		PFR28_04067	0.78	-2.0
4,644,595	-		PFR28_04067	0.78	-0.3
4,644,595	-		PFR28_04067	0.78	+0.9
4,644,595	-		PFR28_04067	0.78	-0.1
4,644,595	-		PFR28_04067	0.78	+1.0
4,644,626	+		PFR28_04067	0.87	+0.4
4,644,633	+		PFR28_04067	0.89	+0.4
4,644,633	+		PFR28_04067	0.89	+0.6
4,644,633	+		PFR28_04067	0.89	+0.2
4,644,633	+		PFR28_04067	0.89	+1.9
4,644,634	-		PFR28_04067	0.89	+0.2
4,644,634	-		PFR28_04067	0.89	+0.9
4,644,634	-		PFR28_04067	0.89	+0.7
4,644,634	-		PFR28_04067	0.89	+1.7
4,644,740	+				+1.5
4,644,741	-				+0.4
4,644,741	-				+0.2
4,644,741	-				+1.5
4,644,741	-				-0.2
4,644,741	-				-0.4
4,644,741	-				-2.5
4,644,741	-				+0.6
4,644,741	-				-3.2
4,644,741	-				-2.0
4,644,741	-				+0.4
4,644,741	-				-0.4
4,644,743	+				+0.8
4,644,743	+				+0.7
4,644,744	-				+0.4
4,644,777	+				+0.4
4,644,777	+				-0.2
4,644,778	-				-1.1
4,644,778	-				-0.0
4,644,783	+				-1.5
4,644,783	+				+0.3
4,644,784	-				-0.3
4,644,843	+				+0.7
4,644,843	+				+0.3
4,644,843	+				-0.8
4,644,843	+				+0.2
4,644,844	-				+1.2
4,644,844	-				-0.6
4,644,844	-				+0.9
4,644,950	-				+0.2
4,644,973	+				-0.3
4,645,037	+				-1.7
4,645,038	-				+0.6
4,645,070	+				-3.5
4,645,071	-				-0.6
4,645,071	-				-1.6
4,645,071	-				+0.5
4,645,238	+		PFR28_04068	0.14	-0.8
4,645,238	+		PFR28_04068	0.14	+0.3
4,645,238	+		PFR28_04068	0.14	-0.9
4,645,238	+		PFR28_04068	0.14	-0.5
4,645,238	+		PFR28_04068	0.14	-0.8
4,645,238	+		PFR28_04068	0.14	-0.5
4,645,239	-		PFR28_04068	0.14	-1.3
4,645,239	-		PFR28_04068	0.14	+1.7
4,645,239	-		PFR28_04068	0.14	-0.4
4,645,287	-		PFR28_04068	0.17	+0.2
4,645,287	-		PFR28_04068	0.17	+0.3
4,645,287	-		PFR28_04068	0.17	-0.6
4,645,287	-		PFR28_04068	0.17	-0.1
4,645,313	-		PFR28_04068	0.18	+0.3
4,645,364	+		PFR28_04068	0.21	-1.1
4,645,364	+		PFR28_04068	0.21	+0.5
4,645,364	+		PFR28_04068	0.21	-1.3
4,645,364	+		PFR28_04068	0.21	-0.1
4,645,364	+		PFR28_04068	0.21	+2.1
4,645,364	+		PFR28_04068	0.21	-0.0
4,645,364	+		PFR28_04068	0.21	-0.3
4,645,364	+		PFR28_04068	0.21	-1.6
4,645,364	+		PFR28_04068	0.21	-0.3
4,645,365	-		PFR28_04068	0.21	-0.5
4,645,365	-		PFR28_04068	0.21	-0.5
4,645,365	-		PFR28_04068	0.21	-0.4
4,645,365	-		PFR28_04068	0.21	-1.0
4,645,365	-		PFR28_04068	0.21	+0.5
4,645,365	-		PFR28_04068	0.21	+2.2
4,645,365	-		PFR28_04068	0.21	+0.4
4,645,365	-		PFR28_04068	0.21	-3.2
4,645,365	-		PFR28_04068	0.21	+0.1
4,645,365	-		PFR28_04068	0.21	+0.0
4,645,408	-		PFR28_04068	0.23	-0.8
4,645,466	+		PFR28_04068	0.26	-1.8