Strain Fitness in Pseudomonas sp. RS175 around PFR28_02338

Experiment: D-Trehalose (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose (C) 5 mM
2,791,693	-		PFR28_02337	0.12	+0.1
2,792,053	+		PFR28_02337	0.54	-0.8
2,792,054	-		PFR28_02337	0.54	+0.7
2,792,340	+		PFR28_02337	0.87	+0.0
2,792,341	-		PFR28_02337	0.87	+1.4
2,792,493	-				-1.4
2,792,498	-				-0.5
2,792,533	+				+0.2
2,792,534	-				+0.4
2,792,660	+		PFR28_02338	0.15	+0.2
2,793,023	+		PFR28_02338	0.54	+0.0
2,793,023	+		PFR28_02338	0.54	+0.4
2,793,023	+		PFR28_02338	0.54	-0.0
2,793,023	+		PFR28_02338	0.54	-2.3
2,793,024	-		PFR28_02338	0.54	-0.5
2,793,024	-		PFR28_02338	0.54	+0.6
2,793,024	-		PFR28_02338	0.54	+0.7
2,793,263	+		PFR28_02338	0.79	+0.3
2,793,263	+		PFR28_02338	0.79	-0.7
2,793,263	+		PFR28_02338	0.79	+0.9
2,793,264	-		PFR28_02338	0.79	-1.9
2,793,314	+		PFR28_02338	0.85	+0.6
2,793,315	-		PFR28_02338	0.85	+1.2
2,793,315	-		PFR28_02338	0.85	-0.7
2,793,497	-				+1.1
2,793,601	+		PFR28_02339	0.23	+0.9
2,793,601	+		PFR28_02339	0.23	+0.1
2,793,727	+		PFR28_02339	0.46	+1.5
2,793,728	-		PFR28_02339	0.46	+1.0
2,793,728	-		PFR28_02339	0.46	+0.7
2,793,728	-		PFR28_02339	0.46	+1.3
2,793,736	+		PFR28_02339	0.48	-0.4
2,793,737	-		PFR28_02339	0.48	+0.7
2,793,740	+		PFR28_02339	0.49	-0.2
2,793,741	-		PFR28_02339	0.49	-0.7
2,793,741	-		PFR28_02339	0.49	-0.0
2,793,741	-		PFR28_02339	0.49	+0.6
2,793,741	-		PFR28_02339	0.49	+2.0
2,793,845	-		PFR28_02339	0.68	-0.5
2,793,880	+		PFR28_02339	0.75	-0.2
2,793,881	-		PFR28_02339	0.75	-0.3
2,793,881	-		PFR28_02339	0.75	+0.9
2,793,881	-		PFR28_02339	0.75	+0.6
2,793,881	-		PFR28_02339	0.75	+0.4
2,793,997	+				+0.0
2,793,997	+				+0.1
2,794,068	-				+0.2
2,794,127	+				-0.9
2,794,127	+				-2.9
2,794,127	+				-3.2
2,794,128	-				-3.5
2,794,128	-				-0.5
2,794,128	-				-2.5
2,794,199	+		PFR28_02340	0.10	-2.8
2,794,433	+		PFR28_02340	0.24	-4.5
2,794,433	+		PFR28_02340	0.24	+1.3