Strain Fitness in Pseudomonas sp. RS175 around PFR28_03321

Experiment: D-Trehalose (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose (C) 5 mM
3,827,287	+		PFR28_03319	0.73	+0.4
3,827,495	+				+0.8
3,827,531	-				+1.3
3,827,531	-				+0.6
3,827,572	+				-3.6
3,827,572	+				-0.6
3,827,572	+				+0.7
3,827,572	+				-0.9
3,827,572	+				+0.2
3,827,572	+				-2.4
3,827,572	+				+1.3
3,827,573	-				+0.1
3,827,573	-				-1.8
3,827,573	-				-0.6
3,827,573	-				+0.6
3,827,573	-				+0.4
3,827,573	-				-2.2
3,827,573	-				+1.4
3,827,573	-				-2.8
3,827,573	-				-1.3
3,827,573	-				-3.5
3,827,575	+				-1.3
3,827,575	+				+0.9
3,827,575	+				-0.4
3,827,575	+				+2.2
3,828,143	+		PFR28_03320	0.90	+0.5
3,828,211	+				-0.1
3,828,212	-				+0.9
3,828,212	-				-1.0
3,828,212	-				+0.7
3,828,212	-				+0.3
3,828,460	+		PFR28_03321	0.85	-3.1
3,828,460	+		PFR28_03321	0.85	-0.5
3,828,552	-				-0.0
3,828,552	-				+2.4
3,828,670	+				-0.1
3,828,671	-				-1.2
3,828,679	+				+0.8
3,828,679	+				-1.0
3,828,679	+				+0.7
3,828,680	-				+0.1
3,828,680	-				-0.6
3,828,680	-				-1.1
3,828,680	-				-0.4
3,828,688	+				-1.8
3,828,876	+		PFR28_03322	0.39	+0.3
3,828,890	-		PFR28_03322	0.42	-0.4
3,829,069	-		PFR28_03322	0.86	-0.1
3,829,078	+		PFR28_03322	0.88	-0.8
3,829,099	+				-0.3
3,829,099	+				+0.4
3,829,099	+				-0.8
3,829,099	+				-0.5
3,829,100	-				-0.4
3,829,100	-				-0.4
3,829,100	-				+0.3
3,829,100	-				-1.1
3,829,100	-				+0.7
3,829,120	-				-0.0
3,829,148	-				+0.9
3,829,148	-				-1.2
3,829,429	-		PFR28_03323	0.44	-1.7