Strain Fitness in Pseudomonas sp. RS175 around PFR28_02211

Experiment: D-Trehalose (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose (C) 5 mM
2,537,772	-				+0.9
2,537,787	+				+0.4
2,537,832	-				-0.1
2,537,862	+				+0.1
2,537,862	+				-0.9
2,537,863	-				+1.1
2,537,863	-				-0.8
2,537,863	-				+1.5
2,538,123	-		PFR28_02210	0.42	-1.0
2,538,503	+				+0.6
2,538,512	+				+0.6
2,538,512	+				+0.0
2,538,512	+				-1.2
2,538,512	+				-2.2
2,538,513	-				+1.0
2,538,513	-				-2.3
2,538,513	-				-0.8
2,538,513	-				-0.4
2,538,527	+				+0.5
2,538,527	+				+0.2
2,538,528	-				+0.4
2,538,604	+				-0.7
2,538,605	-				-1.1
2,538,651	+				-1.5
2,538,652	-				-1.5
2,538,675	+				+0.8
2,538,675	+				+0.3
2,538,675	+				+0.4
2,538,675	+				+0.5
2,538,675	+				-1.4
2,538,675	+				+0.2
2,538,676	-				+0.4
2,538,676	-				+0.9
2,538,676	-				+0.0
2,538,676	-				-0.5
2,538,676	-				-0.2
2,538,686	+				-1.3
2,538,709	-				-0.2
2,538,730	+		PFR28_02211	0.12	+0.1
2,539,043	+				-1.0
2,539,043	+				+0.0
2,539,043	+				-0.4
2,539,043	+				-0.4
2,539,043	+				+1.4
2,539,044	-				-0.1
2,539,044	-				-1.1
2,539,044	-				-0.5
2,539,044	-				-2.0
2,539,075	+				-0.5
2,539,075	+				-1.2
2,539,075	+				+0.0
2,539,075	+				-0.2
2,539,075	+				-0.5
2,539,075	+				+0.2
2,539,076	-				+0.6
2,539,076	-				+0.9
2,539,134	+		PFR28_02212	0.13	-0.5
2,539,135	-		PFR28_02212	0.13	-1.7
2,539,343	-		PFR28_02212	0.57	+0.0
2,539,559	+				+0.5
2,539,560	-				-2.2
2,539,728	+		PFR28_02213	0.21	+0.5
2,539,728	+		PFR28_02213	0.21	+0.4
2,539,728	+		PFR28_02213	0.21	+0.5
2,539,729	-		PFR28_02213	0.21	-2.0
2,539,729	-		PFR28_02213	0.21	-3.5
2,539,903	-		PFR28_02213	0.41	-1.1
2,539,903	-		PFR28_02213	0.41	-1.8
2,539,924	-		PFR28_02213	0.43	+0.2
2,540,070	+		PFR28_02213	0.60	-0.8
2,540,070	+		PFR28_02213	0.60	-1.5
2,540,071	-		PFR28_02213	0.60	-0.8