Strain Fitness in Pseudomonas sp. RS175 around PFR28_02051

Experiment: D-Trehalose (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose (C) 5 mM
2,319,683	+		PFR28_02049	0.54	-0.6
2,319,683	+		PFR28_02049	0.54	+1.1
2,319,683	+		PFR28_02049	0.54	-3.4
2,319,684	-		PFR28_02049	0.54	-2.5
2,319,755	-		PFR28_02049	0.61	+0.8
2,319,755	-		PFR28_02049	0.61	+1.1
2,319,755	-		PFR28_02049	0.61	+2.3
2,319,755	-		PFR28_02049	0.61	+0.6
2,319,935	-		PFR28_02049	0.79	-0.4
2,320,030	+		PFR28_02049	0.89	-0.7
2,320,031	-		PFR28_02049	0.89	-0.0
2,320,141	-				+0.3
2,320,183	-				-2.2
2,320,443	+		PFR28_02050	0.89	-0.2
2,320,443	+		PFR28_02050	0.89	-1.3
2,320,443	+		PFR28_02050	0.89	+0.2
2,320,443	+		PFR28_02050	0.89	+0.1
2,320,443	+		PFR28_02050	0.89	+0.4
2,320,443	+		PFR28_02050	0.89	-2.6
2,320,444	-		PFR28_02050	0.89	+2.3
2,320,444	-		PFR28_02050	0.89	-0.7
2,320,554	+				+0.5
2,320,554	+				-0.8
2,320,555	-				-0.1
2,320,820	+		PFR28_02051	0.18	-1.0
2,320,821	-		PFR28_02051	0.18	-0.2
2,320,821	-		PFR28_02051	0.18	-0.1
2,320,821	-		PFR28_02051	0.18	+0.9
2,320,934	+		PFR28_02051	0.26	+0.8
2,320,937	+		PFR28_02051	0.26	+0.2
2,320,991	-		PFR28_02051	0.30	+1.4
2,321,177	-		PFR28_02051	0.42	+1.9
2,321,177	-		PFR28_02051	0.42	-0.2
2,321,587	+		PFR28_02051	0.71	-0.1
2,321,588	-		PFR28_02051	0.71	-1.0
2,321,588	-		PFR28_02051	0.71	-0.3
2,322,026	+				+2.9
2,322,075	+				+1.6
2,322,075	+				-0.3
2,322,076	-				+0.2
2,322,076	-				+0.1
2,322,076	-				+0.1
2,322,076	-				+1.5
2,322,076	-				+1.2
2,322,076	-				-0.4
2,322,176	+		PFR28_02052	0.11	-1.2
2,322,176	+		PFR28_02052	0.11	-0.7
2,322,176	+		PFR28_02052	0.11	+0.5
2,322,177	-		PFR28_02052	0.11	-0.6
2,322,177	-		PFR28_02052	0.11	+0.8
2,322,199	+		PFR28_02052	0.14	-0.3
2,322,200	-		PFR28_02052	0.14	-1.6
2,322,432	+		PFR28_02052	0.44	-1.5
2,322,432	+		PFR28_02052	0.44	-1.3
2,322,507	-		PFR28_02052	0.53	-1.9
2,322,543	+		PFR28_02052	0.58	+1.8
2,322,560	+		PFR28_02052	0.60	+0.5
2,322,560	+		PFR28_02052	0.60	+0.7
2,322,560	+		PFR28_02052	0.60	+0.7
2,322,629	+		PFR28_02052	0.69	-0.7
2,322,693	+		PFR28_02052	0.78	+0.4
2,322,694	-		PFR28_02052	0.78	+0.0
2,322,946	+				-1.7
2,322,946	+				+0.1
2,322,946	+				+0.0
2,322,947	-				+0.0
2,322,947	-				+1.4
2,322,947	-				+1.9
2,322,947	-				-0.9
2,322,959	+				+1.7
2,322,959	+				+0.3
2,322,959	+				-1.0
2,322,959	+				+0.8
2,322,960	-				-1.2
2,322,960	-				+0.0
2,322,960	-				-0.6