Strain Fitness in Erwinia amylovora T8 around OLJFJH_03325

Experiment: Matrix:KB soft agar;Phage:PBS;Temp:17;Samp:24-4

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOLJFJH_03320 and OLJFJH_03325 are separated by 752 nucleotidesOLJFJH_03325 and OLJFJH_03330 are separated by 352 nucleotides OLJFJH_03320: OLJFJH_03320 - hypothetical protein, at 627,549 to 632,342 _03320 OLJFJH_03325: OLJFJH_03325 - Methyl-accepting chemotaxis protein (MCP) signalling domain-containing protein, at 633,095 to 634,639 _03325 OLJFJH_03330: OLJFJH_03330 - glutamate/aspartate:proton symporter GltP, at 634,992 to 636,293 _03330 Position (kb) 633 634 635Strain fitness (log2 ratio) -3 -2 -1 0 1at 632.318 kb on + strandat 632.368 kb on - strandat 632.436 kb on - strandat 632.436 kb on - strandat 632.510 kb on + strandat 632.514 kb on - strandat 632.677 kb on - strandat 632.711 kb on + strandat 632.776 kb on - strandat 632.828 kb on - strandat 633.063 kb on - strandat 633.085 kb on - strandat 633.146 kb on - strandat 633.146 kb on - strandat 633.347 kb on + strand, within OLJFJH_03325at 633.347 kb on + strand, within OLJFJH_03325at 633.347 kb on + strand, within OLJFJH_03325at 633.347 kb on + strand, within OLJFJH_03325at 633.347 kb on + strand, within OLJFJH_03325at 633.348 kb on - strand, within OLJFJH_03325at 633.348 kb on - strand, within OLJFJH_03325at 633.348 kb on - strand, within OLJFJH_03325at 633.348 kb on - strand, within OLJFJH_03325at 633.348 kb on - strand, within OLJFJH_03325at 633.348 kb on - strand, within OLJFJH_03325at 633.348 kb on - strand, within OLJFJH_03325at 633.348 kb on - strand, within OLJFJH_03325at 633.367 kb on + strand, within OLJFJH_03325at 633.368 kb on - strand, within OLJFJH_03325at 633.368 kb on - strand, within OLJFJH_03325at 633.505 kb on + strand, within OLJFJH_03325at 633.517 kb on + strand, within OLJFJH_03325at 633.517 kb on + strand, within OLJFJH_03325at 633.521 kb on - strand, within OLJFJH_03325at 633.521 kb on - strand, within OLJFJH_03325at 633.557 kb on - strand, within OLJFJH_03325at 633.668 kb on + strand, within OLJFJH_03325at 633.815 kb on + strand, within OLJFJH_03325at 633.815 kb on + strand, within OLJFJH_03325at 633.815 kb on + strand, within OLJFJH_03325at 633.815 kb on + strand, within OLJFJH_03325at 633.816 kb on - strand, within OLJFJH_03325at 634.079 kb on + strand, within OLJFJH_03325at 634.088 kb on + strand, within OLJFJH_03325at 634.120 kb on + strand, within OLJFJH_03325at 634.121 kb on - strand, within OLJFJH_03325at 634.251 kb on + strand, within OLJFJH_03325at 634.252 kb on - strand, within OLJFJH_03325at 634.253 kb on + strand, within OLJFJH_03325at 634.254 kb on - strand, within OLJFJH_03325at 634.254 kb on - strand, within OLJFJH_03325at 634.291 kb on + strand, within OLJFJH_03325at 634.306 kb on + strand, within OLJFJH_03325at 634.306 kb on + strand, within OLJFJH_03325at 634.306 kb on + strand, within OLJFJH_03325at 634.307 kb on - strand, within OLJFJH_03325at 634.307 kb on - strand, within OLJFJH_03325at 634.307 kb on - strand, within OLJFJH_03325at 634.307 kb on - strand, within OLJFJH_03325at 634.308 kb on + strand, within OLJFJH_03325at 634.309 kb on - strand, within OLJFJH_03325at 634.309 kb on - strand, within OLJFJH_03325at 634.309 kb on - strand, within OLJFJH_03325at 634.309 kb on - strand, within OLJFJH_03325at 634.316 kb on + strand, within OLJFJH_03325at 634.316 kb on + strand, within OLJFJH_03325at 634.316 kb on + strand, within OLJFJH_03325at 634.316 kb on + strand, within OLJFJH_03325at 634.316 kb on + strand, within OLJFJH_03325at 634.317 kb on - strand, within OLJFJH_03325at 634.436 kb on - strand, within OLJFJH_03325at 634.480 kb on + strand, within OLJFJH_03325at 634.480 kb on + strand, within OLJFJH_03325at 634.481 kb on - strand, within OLJFJH_03325at 634.481 kb on - strand, within OLJFJH_03325at 634.546 kb on - strandat 634.605 kb on + strandat 634.606 kb on - strandat 634.606 kb on - strandat 634.807 kb on + strandat 634.885 kb on - strandat 635.020 kb on - strandat 635.026 kb on + strandat 635.026 kb on + strandat 635.026 kb on + strandat 635.315 kb on + strand, within OLJFJH_03330at 635.315 kb on + strand, within OLJFJH_03330at 635.316 kb on - strand, within OLJFJH_03330at 635.319 kb on + strand, within OLJFJH_03330at 635.379 kb on + strand, within OLJFJH_03330at 635.581 kb on + strand, within OLJFJH_03330at 635.582 kb on - strand, within OLJFJH_03330

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Per-strain Table

Position Strand Gene LocusTag Fraction Matrix:KB soft agar;Phage:PBS;Temp:17;Samp:24-4
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632,318 + +0.6
632,368 - -0.1
632,436 - +0.1
632,436 - -0.3
632,510 + +0.8
632,514 - -0.6
632,677 - -0.1
632,711 + -0.3
632,776 - +0.7
632,828 - -0.2
633,063 - -0.5
633,085 - -0.1
633,146 - -1.0
633,146 - -0.9
633,347 + OLJFJH_03325 0.16 -0.8
633,347 + OLJFJH_03325 0.16 -0.8
633,347 + OLJFJH_03325 0.16 -0.6
633,347 + OLJFJH_03325 0.16 -0.9
633,347 + OLJFJH_03325 0.16 -1.4
633,348 - OLJFJH_03325 0.16 -1.3
633,348 - OLJFJH_03325 0.16 -0.6
633,348 - OLJFJH_03325 0.16 -0.8
633,348 - OLJFJH_03325 0.16 -0.8
633,348 - OLJFJH_03325 0.16 -0.9
633,348 - OLJFJH_03325 0.16 -0.7
633,348 - OLJFJH_03325 0.16 -0.7
633,348 - OLJFJH_03325 0.16 -0.5
633,367 + OLJFJH_03325 0.18 -0.5
633,368 - OLJFJH_03325 0.18 -0.2
633,368 - OLJFJH_03325 0.18 -1.6
633,505 + OLJFJH_03325 0.27 -1.0
633,517 + OLJFJH_03325 0.27 -1.1
633,517 + OLJFJH_03325 0.27 -0.9
633,521 - OLJFJH_03325 0.28 -0.3
633,521 - OLJFJH_03325 0.28 -1.9
633,557 - OLJFJH_03325 0.30 -1.0
633,668 + OLJFJH_03325 0.37 -2.4
633,815 + OLJFJH_03325 0.47 -0.5
633,815 + OLJFJH_03325 0.47 -0.1
633,815 + OLJFJH_03325 0.47 +0.6
633,815 + OLJFJH_03325 0.47 +1.1
633,816 - OLJFJH_03325 0.47 -0.9
634,079 + OLJFJH_03325 0.64 -1.1
634,088 + OLJFJH_03325 0.64 -0.3
634,120 + OLJFJH_03325 0.66 -0.4
634,121 - OLJFJH_03325 0.66 -0.7
634,251 + OLJFJH_03325 0.75 -0.7
634,252 - OLJFJH_03325 0.75 -0.3
634,253 + OLJFJH_03325 0.75 -1.0
634,254 - OLJFJH_03325 0.75 -2.4
634,254 - OLJFJH_03325 0.75 -3.3
634,291 + OLJFJH_03325 0.77 -2.1
634,306 + OLJFJH_03325 0.78 -0.9
634,306 + OLJFJH_03325 0.78 -0.7
634,306 + OLJFJH_03325 0.78 -1.6
634,307 - OLJFJH_03325 0.78 -0.9
634,307 - OLJFJH_03325 0.78 -0.8
634,307 - OLJFJH_03325 0.78 -0.8
634,307 - OLJFJH_03325 0.78 -1.3
634,308 + OLJFJH_03325 0.79 -1.6
634,309 - OLJFJH_03325 0.79 +0.3
634,309 - OLJFJH_03325 0.79 -0.4
634,309 - OLJFJH_03325 0.79 -0.4
634,309 - OLJFJH_03325 0.79 +0.1
634,316 + OLJFJH_03325 0.79 -1.6
634,316 + OLJFJH_03325 0.79 -0.7
634,316 + OLJFJH_03325 0.79 -0.6
634,316 + OLJFJH_03325 0.79 -1.1
634,316 + OLJFJH_03325 0.79 -0.6
634,317 - OLJFJH_03325 0.79 -1.5
634,436 - OLJFJH_03325 0.87 -0.2
634,480 + OLJFJH_03325 0.90 -0.8
634,480 + OLJFJH_03325 0.90 -1.6
634,481 - OLJFJH_03325 0.90 -0.5
634,481 - OLJFJH_03325 0.90 -0.6
634,546 - -0.8
634,605 + -1.2
634,606 - -0.5
634,606 - -0.7
634,807 + +0.5
634,885 - +0.1
635,020 - -0.1
635,026 + +0.0
635,026 + +0.6
635,026 + -0.4
635,315 + OLJFJH_03330 0.25 -0.2
635,315 + OLJFJH_03330 0.25 -0.4
635,316 - OLJFJH_03330 0.25 -0.5
635,319 + OLJFJH_03330 0.25 -0.7
635,379 + OLJFJH_03330 0.30 +0.2
635,581 + OLJFJH_03330 0.45 -0.9
635,582 - OLJFJH_03330 0.45 +0.4

Or see this region's nucleotide sequence