Experiment: Matrix:KB soft agar;Phage:cocktail;Temp:17;Samp:22-6
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_04475 and OLJFJH_04480 are separated by 742 nucleotides OLJFJH_04480 and OLJFJH_04485 are separated by 21 nucleotides OLJFJH_04485 and OLJFJH_04490 are separated by 16 nucleotides
OLJFJH_04475: OLJFJH_04475 - LuxR family transcriptional regulator, at 869,408 to 870,007
_04475
OLJFJH_04480: OLJFJH_04480 - D-amino-acid oxidase, at 870,750 to 872,042
_04480
OLJFJH_04485: OLJFJH_04485 - Enamine/imine deaminase, at 872,064 to 872,486
_04485
OLJFJH_04490: OLJFJH_04490 - ornithine cyclodeaminase, at 872,503 to 873,642
_04490
Position (kb) 870
871
872
873 Strain fitness (log2 ratio) -2
-1
0
1
2 at 869.785 kb on - strand, within OLJFJH_04475 at 870.239 kb on - strand at 870.248 kb on - strand at 870.248 kb on - strand at 870.392 kb on + strand at 870.484 kb on + strand at 870.487 kb on + strand at 870.522 kb on - strand at 870.533 kb on + strand at 870.537 kb on + strand at 870.538 kb on - strand at 870.538 kb on - strand at 870.538 kb on - strand at 870.538 kb on - strand at 870.541 kb on - strand at 870.639 kb on + strand at 870.751 kb on + strand at 870.992 kb on + strand, within OLJFJH_04480 at 871.241 kb on + strand, within OLJFJH_04480 at 871.242 kb on - strand, within OLJFJH_04480 at 871.319 kb on + strand, within OLJFJH_04480 at 871.320 kb on - strand, within OLJFJH_04480 at 871.342 kb on - strand, within OLJFJH_04480 at 871.458 kb on + strand, within OLJFJH_04480 at 871.458 kb on + strand, within OLJFJH_04480 at 871.459 kb on - strand, within OLJFJH_04480 at 871.459 kb on - strand, within OLJFJH_04480 at 871.459 kb on - strand, within OLJFJH_04480 at 871.459 kb on - strand, within OLJFJH_04480 at 871.488 kb on + strand, within OLJFJH_04480 at 871.489 kb on - strand, within OLJFJH_04480 at 871.489 kb on - strand, within OLJFJH_04480 at 871.586 kb on + strand, within OLJFJH_04480 at 871.650 kb on + strand, within OLJFJH_04480 at 871.734 kb on - strand, within OLJFJH_04480 at 871.734 kb on - strand, within OLJFJH_04480 at 871.769 kb on - strand, within OLJFJH_04480 at 871.923 kb on - strand at 871.926 kb on - strand at 871.926 kb on - strand at 871.926 kb on - strand at 872.042 kb on + strand at 872.042 kb on + strand at 872.042 kb on + strand at 872.043 kb on - strand at 872.043 kb on - strand at 872.043 kb on - strand at 872.138 kb on + strand, within OLJFJH_04485 at 872.138 kb on + strand, within OLJFJH_04485 at 872.138 kb on + strand, within OLJFJH_04485 at 872.138 kb on + strand, within OLJFJH_04485 at 872.140 kb on + strand, within OLJFJH_04485 at 872.229 kb on + strand, within OLJFJH_04485 at 872.229 kb on + strand, within OLJFJH_04485 at 872.250 kb on - strand, within OLJFJH_04485 at 872.387 kb on + strand, within OLJFJH_04485 at 872.387 kb on + strand, within OLJFJH_04485 at 872.391 kb on - strand, within OLJFJH_04485 at 872.423 kb on + strand, within OLJFJH_04485 at 872.424 kb on - strand, within OLJFJH_04485 at 872.607 kb on + strand at 872.622 kb on + strand, within OLJFJH_04490 at 872.622 kb on + strand, within OLJFJH_04490 at 872.623 kb on - strand, within OLJFJH_04490 at 872.623 kb on - strand, within OLJFJH_04490 at 872.730 kb on + strand, within OLJFJH_04490 at 872.798 kb on + strand, within OLJFJH_04490 at 872.957 kb on + strand, within OLJFJH_04490 at 872.957 kb on + strand, within OLJFJH_04490 at 872.958 kb on - strand, within OLJFJH_04490 at 873.018 kb on + strand, within OLJFJH_04490 at 873.018 kb on + strand, within OLJFJH_04490 at 873.019 kb on - strand, within OLJFJH_04490
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:KB soft agar;Phage:cocktail;Temp:17;Samp:22-6 remove 869,785 - OLJFJH_04475 0.63 +1.2 870,239 - -1.0 870,248 - -1.0 870,248 - -2.7 870,392 + -1.0 870,484 + -1.0 870,487 + +0.1 870,522 - -0.3 870,533 + -0.3 870,537 + +0.6 870,538 - +1.9 870,538 - -0.2 870,538 - -0.7 870,538 - +1.0 870,541 - -0.4 870,639 + -0.3 870,751 + -0.1 870,992 + OLJFJH_04480 0.19 +1.3 871,241 + OLJFJH_04480 0.38 +2.6 871,242 - OLJFJH_04480 0.38 +1.8 871,319 + OLJFJH_04480 0.44 -0.5 871,320 - OLJFJH_04480 0.44 -0.4 871,342 - OLJFJH_04480 0.46 +0.2 871,458 + OLJFJH_04480 0.55 +0.5 871,458 + OLJFJH_04480 0.55 -1.3 871,459 - OLJFJH_04480 0.55 -0.3 871,459 - OLJFJH_04480 0.55 -1.0 871,459 - OLJFJH_04480 0.55 -0.3 871,459 - OLJFJH_04480 0.55 -2.6 871,488 + OLJFJH_04480 0.57 +1.4 871,489 - OLJFJH_04480 0.57 -1.4 871,489 - OLJFJH_04480 0.57 -0.7 871,586 + OLJFJH_04480 0.65 -1.9 871,650 + OLJFJH_04480 0.70 +0.2 871,734 - OLJFJH_04480 0.76 -2.5 871,734 - OLJFJH_04480 0.76 -0.9 871,769 - OLJFJH_04480 0.79 +0.1 871,923 - -1.6 871,926 - -0.2 871,926 - +0.3 871,926 - +0.4 872,042 + -1.4 872,042 + -1.2 872,042 + -1.6 872,043 - +0.1 872,043 - +0.0 872,043 - +0.3 872,138 + OLJFJH_04485 0.17 -0.3 872,138 + OLJFJH_04485 0.17 -0.7 872,138 + OLJFJH_04485 0.17 +0.2 872,138 + OLJFJH_04485 0.17 -1.0 872,140 + OLJFJH_04485 0.18 +1.6 872,229 + OLJFJH_04485 0.39 -1.3 872,229 + OLJFJH_04485 0.39 -0.6 872,250 - OLJFJH_04485 0.44 +0.4 872,387 + OLJFJH_04485 0.76 -1.4 872,387 + OLJFJH_04485 0.76 -0.4 872,391 - OLJFJH_04485 0.77 -1.3 872,423 + OLJFJH_04485 0.85 -0.1 872,424 - OLJFJH_04485 0.85 -0.1 872,607 + +0.7 872,622 + OLJFJH_04490 0.10 +0.5 872,622 + OLJFJH_04490 0.10 -0.8 872,623 - OLJFJH_04490 0.11 -1.0 872,623 - OLJFJH_04490 0.11 +0.5 872,730 + OLJFJH_04490 0.20 -0.6 872,798 + OLJFJH_04490 0.26 -0.7 872,957 + OLJFJH_04490 0.40 -0.3 872,957 + OLJFJH_04490 0.40 -0.0 872,958 - OLJFJH_04490 0.40 -0.4 873,018 + OLJFJH_04490 0.45 -0.2 873,018 + OLJFJH_04490 0.45 -0.0 873,019 - OLJFJH_04490 0.45 -1.5
Or see this region's nucleotide sequence