Strain Fitness in Erwinia amylovora T8 around OLJFJH_12715

Experiment: Matrix:KB soft agar;Phage:cocktail;Temp:17;Samp:22-5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:KB soft agar;Phage:cocktail;Temp:17;Samp:22-5
2,677,410	+				+1.1
2,677,411	-				+2.1
2,677,412	+				+1.8
2,677,412	+				+2.0
2,677,412	+				+1.5
2,677,413	-				+1.4
2,677,413	-				+0.7
2,677,413	-				+0.6
2,677,413	-				+1.6
2,677,416	+				+1.4
2,677,416	+				+1.7
2,677,416	+				+1.6
2,677,416	+				+1.0
2,677,417	-				+0.1
2,677,417	-				+0.4
2,677,417	-				+0.7
2,677,417	-				+0.6
2,677,417	-				+0.7
2,677,417	-				+0.6
2,677,417	-				-0.1
2,677,417	-				+0.6
2,677,575	+				+2.3
2,677,575	+				+2.6
2,677,771	+				+5.5
2,677,771	+				+10.8
2,677,953	-				+4.5
2,678,060	+				-4.0
2,678,060	+				-3.1
2,678,060	+				-4.9
2,678,061	-				-3.3
2,678,061	-				-1.7
2,678,066	+				-3.5
2,678,102	+				-5.1
2,678,108	+				-4.7
2,678,112	-				-5.7
2,678,131	+				-3.8
2,678,189	+				-3.1
2,678,193	+				-5.3
2,678,193	+				-2.5
2,678,194	-				-4.3
2,678,194	-				-5.9
2,678,204	+				-3.5
2,678,205	-				-3.4
2,678,235	+				-1.3
2,678,235	+				-5.4
2,678,277	+				-1.5
2,678,278	-				-5.2
2,678,283	+				-2.8
2,678,284	-				-5.9
2,678,324	-				-2.7
2,678,404	-		OLJFJH_12715	0.15	-4.6
2,678,473	+		OLJFJH_12715	0.34	-5.3
2,678,516	-		OLJFJH_12715	0.47	-0.9
2,678,653	-		OLJFJH_12715	0.85	-3.8
2,678,823	-		OLJFJH_12720	0.21	-2.6
2,678,826	+		OLJFJH_12720	0.21	-4.8
2,678,831	+		OLJFJH_12720	0.22	-5.1
2,678,831	+		OLJFJH_12720	0.22	-2.1
2,678,831	+		OLJFJH_12720	0.22	-3.0
2,678,832	-		OLJFJH_12720	0.22	-5.7
2,678,834	-		OLJFJH_12720	0.22	-2.8
2,678,834	-		OLJFJH_12720	0.22	-3.6
2,678,835	+		OLJFJH_12720	0.23	-2.6
2,678,836	-		OLJFJH_12720	0.23	-4.1
2,678,836	-		OLJFJH_12720	0.23	-4.4
2,678,967	-		OLJFJH_12720	0.45	-3.3
2,679,204	-		OLJFJH_12720	0.86	-4.4
2,679,204	-		OLJFJH_12720	0.86	-3.7
2,679,213	+		OLJFJH_12720	0.88	-1.0
2,679,280	+				-2.8
2,679,473	-				+0.2
2,679,479	-				-0.7
2,679,479	-				+1.2
2,679,524	+		OLJFJH_12725	0.12	-0.2
2,679,625	-		OLJFJH_12725	0.24	-3.2
2,679,639	+		OLJFJH_12725	0.25	+0.0
2,679,639	+		OLJFJH_12725	0.25	+1.6