Strain Fitness in Erwinia amylovora T8 around OLJFJH_12720

Experiment: Matrix:KB soft agar;Phage:PBS;Temp:17;Samp:24-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:KB soft agar;Phage:PBS;Temp:17;Samp:24-2
2,677,771	+				+1.9
2,677,771	+				+2.8
2,677,953	-				+1.6
2,678,060	+				+0.5
2,678,060	+				+0.1
2,678,060	+				+0.1
2,678,061	-				+0.8
2,678,061	-				+0.6
2,678,066	+				+0.4
2,678,102	+				-0.6
2,678,108	+				+0.0
2,678,112	-				+0.0
2,678,131	+				-0.2
2,678,189	+				+0.9
2,678,193	+				+0.3
2,678,193	+				+0.7
2,678,194	-				+0.1
2,678,194	-				+0.1
2,678,204	+				-0.0
2,678,205	-				-0.4
2,678,235	+				-0.8
2,678,235	+				+0.1
2,678,277	+				-0.2
2,678,278	-				-0.2
2,678,283	+				-0.5
2,678,284	-				+0.3
2,678,324	-				+0.3
2,678,404	-		OLJFJH_12715	0.15	+0.1
2,678,473	+		OLJFJH_12715	0.34	-0.0
2,678,516	-		OLJFJH_12715	0.47	-0.3
2,678,653	-		OLJFJH_12715	0.85	+0.1
2,678,823	-		OLJFJH_12720	0.21	+0.1
2,678,826	+		OLJFJH_12720	0.21	+0.1
2,678,831	+		OLJFJH_12720	0.22	-0.3
2,678,831	+		OLJFJH_12720	0.22	-0.3
2,678,831	+		OLJFJH_12720	0.22	+0.0
2,678,832	-		OLJFJH_12720	0.22	+0.4
2,678,834	-		OLJFJH_12720	0.22	+0.4
2,678,834	-		OLJFJH_12720	0.22	+0.1
2,678,835	+		OLJFJH_12720	0.23	+0.4
2,678,836	-		OLJFJH_12720	0.23	-0.4
2,678,836	-		OLJFJH_12720	0.23	+0.1
2,678,967	-		OLJFJH_12720	0.45	+0.7
2,679,204	-		OLJFJH_12720	0.86	+0.1
2,679,204	-		OLJFJH_12720	0.86	+0.3
2,679,213	+		OLJFJH_12720	0.88	-2.0
2,679,280	+				-0.7
2,679,473	-				+1.2
2,679,479	-				-0.4
2,679,479	-				+0.2
2,679,524	+		OLJFJH_12725	0.12	+0.2
2,679,625	-		OLJFJH_12725	0.24	-0.7
2,679,639	+		OLJFJH_12725	0.25	-1.0
2,679,639	+		OLJFJH_12725	0.25	-0.0
2,679,791	+		OLJFJH_12725	0.42	-0.1
2,679,792	-		OLJFJH_12725	0.42	-0.4
2,679,801	+		OLJFJH_12725	0.43	-0.1
2,679,801	+		OLJFJH_12725	0.43	+0.1
2,679,827	+		OLJFJH_12725	0.46	-0.4
2,680,036	+		OLJFJH_12725	0.70	-0.7
2,680,066	-		OLJFJH_12725	0.73	-1.5
2,680,073	+		OLJFJH_12725	0.74	-0.0
2,680,202	+		OLJFJH_12725	0.89	-0.8
2,680,202	+		OLJFJH_12725	0.89	-0.5
2,680,203	-		OLJFJH_12725	0.89	-0.1
2,680,203	-		OLJFJH_12725	0.89	-0.4
2,680,212	+		OLJFJH_12725	0.90	-0.3
2,680,212	+		OLJFJH_12725	0.90	+0.3
2,680,255	+				-1.0
2,680,255	+				-1.0
2,680,255	+				-0.6
2,680,255	+				-0.5
2,680,255	+				-0.3
2,680,256	-				-0.5
2,680,256	-				-0.7
2,680,256	-				-0.5
2,680,256	-				-0.8