Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS22570 and PFLU_RS22575 are separated by 13 nucleotides PFLU_RS22575 and PFLU_RS22580 are separated by 209 nucleotides PFLU_RS22580 and PFLU_RS22585 overlap by 1 nucleotides
PFLU_RS22570: PFLU_RS22570 - ABC transporter substrate-binding protein, at 5,081,831 to 5,083,057
_RS22570
PFLU_RS22575: PFLU_RS22575 - ANTAR domain-containing protein, at 5,083,071 to 5,083,646
_RS22575
PFLU_RS22580: PFLU_RS22580 - NarK/NasA family nitrate transporter, at 5,083,856 to 5,085,067
_RS22580
PFLU_RS22585: PFLU_RS22585 - bifunctional protein-serine/threonine kinase/phosphatase, at 5,085,067 to 5,086,737
_RS22585
Position (kb) 5083
5084
5085
5086 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5082.916 kb on + strand, within PFLU_RS22570 at 5082.995 kb on + strand at 5082.995 kb on + strand at 5082.995 kb on + strand at 5082.995 kb on + strand at 5082.995 kb on + strand at 5082.996 kb on - strand at 5082.996 kb on - strand at 5082.996 kb on - strand at 5083.087 kb on + strand at 5083.365 kb on + strand, within PFLU_RS22575 at 5083.365 kb on + strand, within PFLU_RS22575 at 5083.365 kb on + strand, within PFLU_RS22575 at 5083.365 kb on + strand, within PFLU_RS22575 at 5083.366 kb on - strand, within PFLU_RS22575 at 5083.366 kb on - strand, within PFLU_RS22575 at 5083.366 kb on - strand, within PFLU_RS22575 at 5083.380 kb on - strand, within PFLU_RS22575 at 5083.380 kb on - strand, within PFLU_RS22575 at 5083.380 kb on - strand, within PFLU_RS22575 at 5083.554 kb on + strand, within PFLU_RS22575 at 5083.554 kb on + strand, within PFLU_RS22575 at 5083.554 kb on + strand, within PFLU_RS22575 at 5083.554 kb on + strand, within PFLU_RS22575 at 5083.554 kb on + strand, within PFLU_RS22575 at 5083.554 kb on + strand, within PFLU_RS22575 at 5083.554 kb on + strand, within PFLU_RS22575 at 5083.554 kb on + strand, within PFLU_RS22575 at 5083.554 kb on + strand, within PFLU_RS22575 at 5083.554 kb on + strand, within PFLU_RS22575 at 5083.555 kb on - strand, within PFLU_RS22575 at 5083.555 kb on - strand, within PFLU_RS22575 at 5083.555 kb on - strand, within PFLU_RS22575 at 5083.555 kb on - strand, within PFLU_RS22575 at 5083.555 kb on - strand, within PFLU_RS22575 at 5083.555 kb on - strand, within PFLU_RS22575 at 5083.664 kb on + strand at 5083.665 kb on - strand at 5083.668 kb on + strand at 5083.668 kb on + strand at 5083.668 kb on + strand at 5083.669 kb on - strand at 5083.669 kb on - strand at 5083.669 kb on - strand at 5083.682 kb on - strand at 5083.827 kb on + strand at 5083.827 kb on + strand at 5083.827 kb on + strand at 5083.827 kb on + strand at 5083.827 kb on + strand at 5083.827 kb on + strand at 5083.827 kb on + strand at 5083.827 kb on + strand at 5083.828 kb on - strand at 5083.828 kb on - strand at 5083.828 kb on - strand at 5083.828 kb on - strand at 5083.828 kb on - strand at 5083.828 kb on - strand at 5083.828 kb on - strand at 5083.828 kb on - strand at 5083.913 kb on + strand at 5083.913 kb on + strand at 5083.913 kb on + strand at 5083.913 kb on + strand at 5083.940 kb on + strand at 5083.941 kb on - strand at 5084.112 kb on + strand, within PFLU_RS22580 at 5084.112 kb on + strand, within PFLU_RS22580 at 5084.113 kb on - strand, within PFLU_RS22580 at 5084.159 kb on + strand, within PFLU_RS22580 at 5084.159 kb on + strand, within PFLU_RS22580 at 5084.160 kb on - strand, within PFLU_RS22580 at 5084.291 kb on - strand, within PFLU_RS22580 at 5084.291 kb on - strand, within PFLU_RS22580 at 5084.291 kb on - strand, within PFLU_RS22580 at 5084.459 kb on + strand, within PFLU_RS22580 at 5084.459 kb on + strand, within PFLU_RS22580 at 5084.459 kb on + strand, within PFLU_RS22580 at 5084.460 kb on - strand, within PFLU_RS22580 at 5084.508 kb on - strand, within PFLU_RS22580 at 5084.508 kb on - strand, within PFLU_RS22580 at 5084.559 kb on - strand, within PFLU_RS22580 at 5084.600 kb on + strand, within PFLU_RS22580 at 5084.601 kb on - strand, within PFLU_RS22580 at 5084.601 kb on - strand, within PFLU_RS22580 at 5084.603 kb on + strand, within PFLU_RS22580 at 5084.603 kb on + strand, within PFLU_RS22580 at 5084.603 kb on + strand, within PFLU_RS22580 at 5084.603 kb on + strand, within PFLU_RS22580 at 5084.603 kb on + strand, within PFLU_RS22580 at 5084.603 kb on + strand, within PFLU_RS22580 at 5084.603 kb on + strand, within PFLU_RS22580 at 5084.603 kb on + strand, within PFLU_RS22580 at 5084.604 kb on - strand, within PFLU_RS22580 at 5084.604 kb on - strand, within PFLU_RS22580 at 5084.604 kb on - strand, within PFLU_RS22580 at 5084.699 kb on + strand, within PFLU_RS22580 at 5084.699 kb on + strand, within PFLU_RS22580 at 5084.699 kb on + strand, within PFLU_RS22580 at 5084.699 kb on + strand, within PFLU_RS22580 at 5084.699 kb on + strand, within PFLU_RS22580 at 5084.699 kb on + strand, within PFLU_RS22580 at 5084.699 kb on + strand, within PFLU_RS22580 at 5084.699 kb on + strand, within PFLU_RS22580 at 5084.699 kb on + strand, within PFLU_RS22580 at 5084.699 kb on + strand, within PFLU_RS22580 at 5084.699 kb on + strand, within PFLU_RS22580 at 5084.699 kb on + strand, within PFLU_RS22580 at 5084.699 kb on + strand, within PFLU_RS22580 at 5084.699 kb on + strand, within PFLU_RS22580 at 5084.699 kb on + strand, within PFLU_RS22580 at 5084.699 kb on + strand, within PFLU_RS22580 at 5084.699 kb on + strand, within PFLU_RS22580 at 5084.700 kb on - strand, within PFLU_RS22580 at 5084.700 kb on - strand, within PFLU_RS22580 at 5084.700 kb on - strand, within PFLU_RS22580 at 5084.700 kb on - strand, within PFLU_RS22580 at 5084.700 kb on - strand, within PFLU_RS22580 at 5084.700 kb on - strand, within PFLU_RS22580 at 5084.700 kb on - strand, within PFLU_RS22580 at 5084.700 kb on - strand, within PFLU_RS22580 at 5084.700 kb on - strand, within PFLU_RS22580 at 5084.700 kb on - strand, within PFLU_RS22580 at 5084.706 kb on + strand, within PFLU_RS22580 at 5084.803 kb on + strand, within PFLU_RS22580 at 5084.804 kb on - strand, within PFLU_RS22580 at 5084.804 kb on - strand, within PFLU_RS22580 at 5084.804 kb on - strand, within PFLU_RS22580 at 5084.945 kb on + strand, within PFLU_RS22580 at 5084.946 kb on - strand at 5084.946 kb on - strand at 5085.178 kb on + strand at 5085.178 kb on + strand at 5085.178 kb on + strand at 5085.178 kb on + strand at 5085.178 kb on + strand at 5085.179 kb on - strand at 5085.179 kb on - strand at 5085.203 kb on + strand at 5085.204 kb on - strand at 5085.265 kb on + strand, within PFLU_RS22585 at 5085.265 kb on + strand, within PFLU_RS22585 at 5085.266 kb on - strand, within PFLU_RS22585 at 5085.268 kb on + strand, within PFLU_RS22585 at 5085.268 kb on + strand, within PFLU_RS22585 at 5085.600 kb on + strand, within PFLU_RS22585 at 5085.601 kb on - strand, within PFLU_RS22585 at 5085.794 kb on + strand, within PFLU_RS22585 at 5085.794 kb on + strand, within PFLU_RS22585 at 5085.794 kb on + strand, within PFLU_RS22585 at 5085.794 kb on + strand, within PFLU_RS22585 at 5085.794 kb on + strand, within PFLU_RS22585 at 5085.795 kb on - strand, within PFLU_RS22585 at 5085.854 kb on + strand, within PFLU_RS22585 at 5085.854 kb on + strand, within PFLU_RS22585 at 5085.855 kb on - strand, within PFLU_RS22585 at 5086.063 kb on + strand, within PFLU_RS22585 at 5086.063 kb on + strand, within PFLU_RS22585 at 5086.063 kb on + strand, within PFLU_RS22585 at 5086.063 kb on + strand, within PFLU_RS22585 at 5086.063 kb on + strand, within PFLU_RS22585 at 5086.064 kb on - strand, within PFLU_RS22585 at 5086.064 kb on - strand, within PFLU_RS22585 at 5086.064 kb on - strand, within PFLU_RS22585 at 5086.066 kb on + strand, within PFLU_RS22585 at 5086.066 kb on + strand, within PFLU_RS22585 at 5086.066 kb on + strand, within PFLU_RS22585 at 5086.066 kb on + strand, within PFLU_RS22585 at 5086.066 kb on + strand, within PFLU_RS22585 at 5086.066 kb on + strand, within PFLU_RS22585 at 5086.066 kb on + strand, within PFLU_RS22585 at 5086.066 kb on + strand, within PFLU_RS22585 at 5086.067 kb on - strand, within PFLU_RS22585 at 5086.067 kb on - strand, within PFLU_RS22585 at 5086.067 kb on - strand, within PFLU_RS22585 at 5086.067 kb on - strand, within PFLU_RS22585 at 5086.067 kb on - strand, within PFLU_RS22585 at 5086.067 kb on - strand, within PFLU_RS22585 at 5086.067 kb on - strand, within PFLU_RS22585 at 5086.067 kb on - strand, within PFLU_RS22585 at 5086.067 kb on - strand, within PFLU_RS22585 at 5086.067 kb on - strand, within PFLU_RS22585
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 5,082,916 + PFLU_RS22570 0.88 +0.2 5,082,995 + -0.7 5,082,995 + -0.9 5,082,995 + -0.9 5,082,995 + +0.3 5,082,995 + -0.2 5,082,996 - +0.8 5,082,996 - -0.2 5,082,996 - -0.5 5,083,087 + -0.7 5,083,365 + PFLU_RS22575 0.51 +0.8 5,083,365 + PFLU_RS22575 0.51 +0.4 5,083,365 + PFLU_RS22575 0.51 -0.2 5,083,365 + PFLU_RS22575 0.51 +0.1 5,083,366 - PFLU_RS22575 0.51 +0.5 5,083,366 - PFLU_RS22575 0.51 +0.4 5,083,366 - PFLU_RS22575 0.51 +1.1 5,083,380 - PFLU_RS22575 0.54 -0.2 5,083,380 - PFLU_RS22575 0.54 +0.4 5,083,380 - PFLU_RS22575 0.54 -0.5 5,083,554 + PFLU_RS22575 0.84 -0.3 5,083,554 + PFLU_RS22575 0.84 +0.6 5,083,554 + PFLU_RS22575 0.84 -0.3 5,083,554 + PFLU_RS22575 0.84 +0.8 5,083,554 + PFLU_RS22575 0.84 -1.1 5,083,554 + PFLU_RS22575 0.84 +1.0 5,083,554 + PFLU_RS22575 0.84 +0.6 5,083,554 + PFLU_RS22575 0.84 -1.5 5,083,554 + PFLU_RS22575 0.84 -3.1 5,083,554 + PFLU_RS22575 0.84 -0.8 5,083,555 - PFLU_RS22575 0.84 +1.1 5,083,555 - PFLU_RS22575 0.84 -0.4 5,083,555 - PFLU_RS22575 0.84 +0.1 5,083,555 - PFLU_RS22575 0.84 -2.4 5,083,555 - PFLU_RS22575 0.84 -0.1 5,083,555 - PFLU_RS22575 0.84 +0.3 5,083,664 + +1.6 5,083,665 - -1.4 5,083,668 + -0.2 5,083,668 + +1.6 5,083,668 + +0.4 5,083,669 - +0.1 5,083,669 - -0.2 5,083,669 - +0.0 5,083,682 - -2.3 5,083,827 + +0.4 5,083,827 + -0.5 5,083,827 + +0.4 5,083,827 + -0.8 5,083,827 + -1.0 5,083,827 + +0.5 5,083,827 + -0.1 5,083,827 + -0.5 5,083,828 - -0.1 5,083,828 - +0.3 5,083,828 - +1.0 5,083,828 - +0.4 5,083,828 - +1.4 5,083,828 - +0.1 5,083,828 - +0.1 5,083,828 - -0.8 5,083,913 + -1.6 5,083,913 + -0.7 5,083,913 + +0.9 5,083,913 + -1.6 5,083,940 + +0.1 5,083,941 - -0.0 5,084,112 + PFLU_RS22580 0.21 +1.2 5,084,112 + PFLU_RS22580 0.21 -0.4 5,084,113 - PFLU_RS22580 0.21 -0.0 5,084,159 + PFLU_RS22580 0.25 +0.3 5,084,159 + PFLU_RS22580 0.25 +0.7 5,084,160 - PFLU_RS22580 0.25 +0.5 5,084,291 - PFLU_RS22580 0.36 +0.9 5,084,291 - PFLU_RS22580 0.36 +0.0 5,084,291 - PFLU_RS22580 0.36 +0.2 5,084,459 + PFLU_RS22580 0.50 -0.7 5,084,459 + PFLU_RS22580 0.50 +1.1 5,084,459 + PFLU_RS22580 0.50 +0.5 5,084,460 - PFLU_RS22580 0.50 +0.2 5,084,508 - PFLU_RS22580 0.54 -0.6 5,084,508 - PFLU_RS22580 0.54 -0.1 5,084,559 - PFLU_RS22580 0.58 -0.9 5,084,600 + PFLU_RS22580 0.61 +0.4 5,084,601 - PFLU_RS22580 0.61 -0.9 5,084,601 - PFLU_RS22580 0.61 -1.0 5,084,603 + PFLU_RS22580 0.62 -0.7 5,084,603 + PFLU_RS22580 0.62 +0.0 5,084,603 + PFLU_RS22580 0.62 +0.1 5,084,603 + PFLU_RS22580 0.62 -1.4 5,084,603 + PFLU_RS22580 0.62 +0.5 5,084,603 + PFLU_RS22580 0.62 -0.1 5,084,603 + PFLU_RS22580 0.62 -0.4 5,084,603 + PFLU_RS22580 0.62 +0.4 5,084,604 - PFLU_RS22580 0.62 +0.3 5,084,604 - PFLU_RS22580 0.62 +0.6 5,084,604 - PFLU_RS22580 0.62 +0.7 5,084,699 + PFLU_RS22580 0.70 -0.1 5,084,699 + PFLU_RS22580 0.70 -0.5 5,084,699 + PFLU_RS22580 0.70 +0.2 5,084,699 + PFLU_RS22580 0.70 -0.1 5,084,699 + PFLU_RS22580 0.70 +0.4 5,084,699 + PFLU_RS22580 0.70 -0.1 5,084,699 + PFLU_RS22580 0.70 -0.1 5,084,699 + PFLU_RS22580 0.70 +0.5 5,084,699 + PFLU_RS22580 0.70 +0.2 5,084,699 + PFLU_RS22580 0.70 -0.8 5,084,699 + PFLU_RS22580 0.70 +0.4 5,084,699 + PFLU_RS22580 0.70 -0.4 5,084,699 + PFLU_RS22580 0.70 +0.5 5,084,699 + PFLU_RS22580 0.70 +1.1 5,084,699 + PFLU_RS22580 0.70 +0.9 5,084,699 + PFLU_RS22580 0.70 +1.0 5,084,699 + PFLU_RS22580 0.70 -0.8 5,084,700 - PFLU_RS22580 0.70 -0.1 5,084,700 - PFLU_RS22580 0.70 -0.6 5,084,700 - PFLU_RS22580 0.70 +0.5 5,084,700 - PFLU_RS22580 0.70 -0.8 5,084,700 - PFLU_RS22580 0.70 +0.6 5,084,700 - PFLU_RS22580 0.70 -2.0 5,084,700 - PFLU_RS22580 0.70 +0.6 5,084,700 - PFLU_RS22580 0.70 +0.6 5,084,700 - PFLU_RS22580 0.70 -0.3 5,084,700 - PFLU_RS22580 0.70 -0.3 5,084,706 + PFLU_RS22580 0.70 +0.2 5,084,803 + PFLU_RS22580 0.78 -1.3 5,084,804 - PFLU_RS22580 0.78 -0.3 5,084,804 - PFLU_RS22580 0.78 -0.1 5,084,804 - PFLU_RS22580 0.78 -0.2 5,084,945 + PFLU_RS22580 0.90 +1.0 5,084,946 - -0.4 5,084,946 - +0.5 5,085,178 + +0.3 5,085,178 + -0.6 5,085,178 + +1.0 5,085,178 + +0.1 5,085,178 + +0.7 5,085,179 - +0.4 5,085,179 - -0.4 5,085,203 + -0.1 5,085,204 - +0.7 5,085,265 + PFLU_RS22585 0.12 +0.6 5,085,265 + PFLU_RS22585 0.12 +0.4 5,085,266 - PFLU_RS22585 0.12 +0.2 5,085,268 + PFLU_RS22585 0.12 +0.5 5,085,268 + PFLU_RS22585 0.12 -0.0 5,085,600 + PFLU_RS22585 0.32 +0.7 5,085,601 - PFLU_RS22585 0.32 +0.7 5,085,794 + PFLU_RS22585 0.44 +0.3 5,085,794 + PFLU_RS22585 0.44 -0.4 5,085,794 + PFLU_RS22585 0.44 +0.5 5,085,794 + PFLU_RS22585 0.44 +0.1 5,085,794 + PFLU_RS22585 0.44 -1.0 5,085,795 - PFLU_RS22585 0.44 +1.0 5,085,854 + PFLU_RS22585 0.47 +1.2 5,085,854 + PFLU_RS22585 0.47 -0.2 5,085,855 - PFLU_RS22585 0.47 +1.0 5,086,063 + PFLU_RS22585 0.60 -1.3 5,086,063 + PFLU_RS22585 0.60 +0.2 5,086,063 + PFLU_RS22585 0.60 +2.1 5,086,063 + PFLU_RS22585 0.60 +0.6 5,086,063 + PFLU_RS22585 0.60 +0.6 5,086,064 - PFLU_RS22585 0.60 -0.7 5,086,064 - PFLU_RS22585 0.60 +0.5 5,086,064 - PFLU_RS22585 0.60 +0.3 5,086,066 + PFLU_RS22585 0.60 +0.4 5,086,066 + PFLU_RS22585 0.60 -1.2 5,086,066 + PFLU_RS22585 0.60 -0.4 5,086,066 + PFLU_RS22585 0.60 -0.2 5,086,066 + PFLU_RS22585 0.60 -0.6 5,086,066 + PFLU_RS22585 0.60 -0.9 5,086,066 + PFLU_RS22585 0.60 -0.8 5,086,066 + PFLU_RS22585 0.60 +0.8 5,086,067 - PFLU_RS22585 0.60 -0.1 5,086,067 - PFLU_RS22585 0.60 -0.9 5,086,067 - PFLU_RS22585 0.60 +1.0 5,086,067 - PFLU_RS22585 0.60 -2.4 5,086,067 - PFLU_RS22585 0.60 -1.2 5,086,067 - PFLU_RS22585 0.60 +0.4 5,086,067 - PFLU_RS22585 0.60 +0.4 5,086,067 - PFLU_RS22585 0.60 +1.2 5,086,067 - PFLU_RS22585 0.60 -0.8 5,086,067 - PFLU_RS22585 0.60 +0.9
Or see this region's nucleotide sequence