Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS13195

Experiment: D,L-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate (C)
2,979,934	+		PFLU_RS13190	0.32	+0.0
2,979,934	+		PFLU_RS13190	0.32	+0.8
2,979,935	-		PFLU_RS13190	0.32	+0.4
2,979,935	-		PFLU_RS13190	0.32	-1.1
2,979,996	+		PFLU_RS13190	0.38	+0.8
2,979,997	-		PFLU_RS13190	0.38	+0.9
2,979,997	-		PFLU_RS13190	0.38	-0.1
2,980,023	+		PFLU_RS13190	0.41	+1.3
2,980,036	+		PFLU_RS13190	0.42	+1.0
2,980,036	+		PFLU_RS13190	0.42	-0.5
2,980,037	-		PFLU_RS13190	0.42	+0.8
2,980,037	-		PFLU_RS13190	0.42	-0.7
2,980,037	-		PFLU_RS13190	0.42	+0.4
2,980,072	-		PFLU_RS13190	0.46	+0.4
2,980,098	-		PFLU_RS13190	0.48	+0.2
2,980,174	+		PFLU_RS13190	0.56	+0.9
2,980,174	+		PFLU_RS13190	0.56	+0.2
2,980,174	+		PFLU_RS13190	0.56	-1.7
2,980,174	+		PFLU_RS13190	0.56	-0.7
2,980,174	+		PFLU_RS13190	0.56	-1.0
2,980,174	+		PFLU_RS13190	0.56	-1.3
2,980,175	-		PFLU_RS13190	0.56	+0.2
2,980,175	-		PFLU_RS13190	0.56	+0.2
2,980,175	-		PFLU_RS13190	0.56	-0.3
2,980,175	-		PFLU_RS13190	0.56	-0.2
2,980,175	-		PFLU_RS13190	0.56	+1.0
2,980,175	-		PFLU_RS13190	0.56	-0.6
2,980,175	-		PFLU_RS13190	0.56	-0.7
2,980,175	-		PFLU_RS13190	0.56	-0.8
2,980,175	-		PFLU_RS13190	0.56	+0.4
2,980,175	-		PFLU_RS13190	0.56	+1.2
2,980,175	-		PFLU_RS13190	0.56	-0.3
2,980,183	+		PFLU_RS13190	0.57	+0.6
2,980,246	-		PFLU_RS13190	0.63	+0.1
2,980,273	+		PFLU_RS13190	0.66	+1.5
2,980,273	+		PFLU_RS13190	0.66	+0.8
2,980,273	+		PFLU_RS13190	0.66	+0.2
2,980,274	-		PFLU_RS13190	0.66	+0.2
2,980,274	-		PFLU_RS13190	0.66	+0.5
2,980,307	+		PFLU_RS13190	0.69	+0.7
2,980,358	-		PFLU_RS13190	0.74	-0.5
2,980,358	-		PFLU_RS13190	0.74	+1.3
2,980,358	-		PFLU_RS13190	0.74	+0.5
2,980,358	-		PFLU_RS13190	0.74	+1.3
2,980,361	+		PFLU_RS13190	0.75	+0.2
2,980,362	-		PFLU_RS13190	0.75	+0.2
2,980,362	-		PFLU_RS13190	0.75	+0.1
2,980,459	+		PFLU_RS13190	0.84	+0.3
2,980,582	+				-0.1
2,980,583	-				+1.5
2,980,583	-				+0.2
2,980,597	-				-0.8
2,980,597	-				-0.2
2,980,639	+				-0.2
2,980,639	+				+0.4
2,980,639	+				-1.6
2,980,639	+				+0.1
2,980,640	-				-0.4
2,980,704	-				+0.5
2,980,732	-				-0.6
2,980,732	-				+0.6
2,980,732	-				+0.8
2,980,732	-				+0.4
2,980,733	+				+0.1
2,980,733	+				+0.6
2,980,733	+				-1.0
2,980,733	+				+0.3
2,980,733	+				-0.8
2,980,733	+				-1.3
2,980,733	+				-1.0
2,980,733	+				-0.0
2,980,733	+				-1.5
2,980,733	+				+0.4
2,980,733	+				-0.8
2,980,734	-				-0.6
2,980,734	-				+0.5
2,980,734	-				-0.7
2,980,734	-				+0.2
2,980,734	-				+0.5
2,980,734	-				-0.9
2,980,734	-				+1.1
2,980,734	-				+0.5
2,980,734	-				-0.8
2,980,740	+				+1.0
2,980,740	+				-0.3
2,980,740	+				-1.9
2,980,740	+				+0.0
2,980,741	-				+0.1
2,980,741	-				-1.4
2,980,741	-				+0.6
2,980,750	-				-0.3
2,980,770	+				-0.4
2,980,771	-				-0.0
2,980,792	+				+0.4
2,980,793	-				-0.1
2,980,793	-				-0.6
2,980,822	+				+2.0
2,980,822	+				+1.2
2,980,822	+				+0.2
2,980,823	-				+0.5
2,980,823	-				-0.1
2,980,823	-				-1.1
2,980,823	-				+0.9
2,980,972	+				-0.8
2,981,063	+				+0.3
2,981,063	+				-0.7
2,981,063	+				+1.2
2,981,064	-				-0.1
2,981,064	-				-0.1
2,981,064	-				-1.4
2,981,172	+				+0.9
2,981,173	-				+0.7
2,981,173	-				+0.8
2,981,173	-				+0.7
2,981,243	+				-1.5
2,981,244	-				+0.2
2,981,244	-				-0.3
2,981,253	+				+0.5
2,981,253	+				-1.3
2,981,253	+				+0.0
2,981,253	+				+0.1
2,981,254	-				-0.1
2,981,254	-				-0.5
2,981,254	-				+2.5
2,981,254	-				+0.1
2,981,254	-				-0.4
2,981,254	-				+0.4
2,981,254	-				-0.2
2,981,254	-				+0.6
2,981,688	+		PFLU_RS13195	0.18	+0.6
2,981,689	-		PFLU_RS13195	0.18	+0.2
2,981,721	+		PFLU_RS13195	0.19	-0.3
2,981,851	+		PFLU_RS13195	0.21	+0.8
2,981,851	+		PFLU_RS13195	0.21	+0.2
2,981,851	+		PFLU_RS13195	0.21	+0.4
2,981,851	+		PFLU_RS13195	0.21	+0.6
2,981,852	-		PFLU_RS13195	0.21	+1.1
2,981,852	-		PFLU_RS13195	0.21	-1.4
2,981,852	-		PFLU_RS13195	0.21	+0.0
2,981,868	+		PFLU_RS13195	0.21	-0.5
2,981,895	+		PFLU_RS13195	0.22	-0.6
2,981,895	+		PFLU_RS13195	0.22	-0.1
2,981,896	-		PFLU_RS13195	0.22	+1.3
2,981,915	+		PFLU_RS13195	0.22	+0.8
2,981,915	+		PFLU_RS13195	0.22	+0.6
2,981,915	+		PFLU_RS13195	0.22	+0.2
2,981,915	+		PFLU_RS13195	0.22	-0.2
2,981,915	+		PFLU_RS13195	0.22	+0.1
2,981,915	+		PFLU_RS13195	0.22	-1.0
2,981,916	-		PFLU_RS13195	0.22	-0.3
2,981,916	-		PFLU_RS13195	0.22	-0.2
2,981,916	-		PFLU_RS13195	0.22	+0.1
2,981,952	+		PFLU_RS13195	0.23	-0.6
2,981,952	+		PFLU_RS13195	0.23	-0.4
2,981,969	-		PFLU_RS13195	0.23	+0.4
2,982,095	+		PFLU_RS13195	0.26	+0.1
2,982,095	+		PFLU_RS13195	0.26	-0.2
2,982,095	+		PFLU_RS13195	0.26	-1.0
2,982,095	+		PFLU_RS13195	0.26	-0.1
2,982,096	-		PFLU_RS13195	0.26	+1.2
2,982,096	-		PFLU_RS13195	0.26	-1.8
2,982,201	+		PFLU_RS13195	0.28	+0.2
2,982,201	+		PFLU_RS13195	0.28	-0.2
2,982,201	+		PFLU_RS13195	0.28	-0.1
2,982,201	+		PFLU_RS13195	0.28	+0.0
2,982,201	+		PFLU_RS13195	0.28	-0.0
2,982,202	-		PFLU_RS13195	0.28	-1.5
2,982,202	-		PFLU_RS13195	0.28	+1.5
2,982,202	-		PFLU_RS13195	0.28	+0.3
2,982,202	-		PFLU_RS13195	0.28	+0.7
2,982,224	+		PFLU_RS13195	0.28	+0.3
2,982,224	+		PFLU_RS13195	0.28	-0.5
2,982,224	+		PFLU_RS13195	0.28	-0.9
2,982,224	+		PFLU_RS13195	0.28	-1.4
2,982,224	+		PFLU_RS13195	0.28	+0.4
2,982,225	-		PFLU_RS13195	0.28	-0.1
2,982,225	-		PFLU_RS13195	0.28	-0.5
2,982,225	-		PFLU_RS13195	0.28	-0.4
2,982,367	-		PFLU_RS13195	0.31	-1.2
2,982,367	-		PFLU_RS13195	0.31	-0.5
2,982,367	-		PFLU_RS13195	0.31	-0.4
2,982,454	+		PFLU_RS13195	0.33	+0.3
2,982,455	-		PFLU_RS13195	0.33	+1.0
2,982,456	+		PFLU_RS13195	0.33	+0.6
2,982,457	-		PFLU_RS13195	0.33	+1.6
2,982,457	-		PFLU_RS13195	0.33	+0.7
2,982,457	-		PFLU_RS13195	0.33	-0.0
2,982,457	-		PFLU_RS13195	0.33	-1.3
2,982,457	-		PFLU_RS13195	0.33	+0.7
2,982,457	-		PFLU_RS13195	0.33	+0.3
2,982,515	+		PFLU_RS13195	0.34	+1.1
2,982,516	-		PFLU_RS13195	0.34	-0.4
2,982,576	+		PFLU_RS13195	0.35	+0.9
2,982,576	+		PFLU_RS13195	0.35	-0.3
2,982,579	+		PFLU_RS13195	0.35	+0.2
2,982,579	+		PFLU_RS13195	0.35	+1.7
2,982,579	+		PFLU_RS13195	0.35	-0.1
2,982,589	-		PFLU_RS13195	0.36	-1.4
2,983,070	+		PFLU_RS13195	0.45	-1.3
2,983,070	+		PFLU_RS13195	0.45	+0.1
2,983,071	-		PFLU_RS13195	0.45	-1.4
2,983,071	-		PFLU_RS13195	0.45	+0.1
2,983,072	+		PFLU_RS13195	0.45	-0.6
2,983,072	+		PFLU_RS13195	0.45	-1.4
2,983,072	+		PFLU_RS13195	0.45	-0.3
2,983,073	-		PFLU_RS13195	0.45	+0.6
2,983,073	-		PFLU_RS13195	0.45	+0.4
2,983,073	-		PFLU_RS13195	0.45	+0.3
2,983,098	+		PFLU_RS13195	0.46	+0.5
2,983,098	+		PFLU_RS13195	0.46	-1.3
2,983,099	-		PFLU_RS13195	0.46	+1.2
2,983,099	-		PFLU_RS13195	0.46	-1.3
2,983,158	+		PFLU_RS13195	0.47	-2.1
2,983,158	+		PFLU_RS13195	0.47	-0.1
2,983,158	+		PFLU_RS13195	0.47	+0.7
2,983,159	-		PFLU_RS13195	0.47	+0.3
2,983,159	-		PFLU_RS13195	0.47	-0.2
2,983,164	+		PFLU_RS13195	0.47	+0.4
2,983,164	+		PFLU_RS13195	0.47	+0.9
2,983,164	+		PFLU_RS13195	0.47	-0.2
2,983,165	-		PFLU_RS13195	0.47	+0.2
2,983,281	+		PFLU_RS13195	0.49	+0.3
2,983,395	+		PFLU_RS13195	0.51	-0.4
2,983,395	+		PFLU_RS13195	0.51	-0.3
2,983,395	+		PFLU_RS13195	0.51	+0.3
2,983,395	+		PFLU_RS13195	0.51	-1.6
2,983,396	-		PFLU_RS13195	0.52	+0.6
2,983,396	-		PFLU_RS13195	0.52	+1.5
2,983,396	-		PFLU_RS13195	0.52	-0.3
2,983,396	-		PFLU_RS13195	0.52	+0.0
2,983,465	+		PFLU_RS13195	0.53	-1.0
2,983,465	+		PFLU_RS13195	0.53	+0.3
2,983,465	+		PFLU_RS13195	0.53	-0.7
2,983,465	+		PFLU_RS13195	0.53	+0.5
2,983,465	+		PFLU_RS13195	0.53	-0.2
2,983,465	+		PFLU_RS13195	0.53	-0.7
2,983,466	-		PFLU_RS13195	0.53	+0.7
2,983,466	-		PFLU_RS13195	0.53	-0.1
2,983,466	-		PFLU_RS13195	0.53	+0.2
2,983,466	-		PFLU_RS13195	0.53	+0.1
2,983,466	-		PFLU_RS13195	0.53	+0.2
2,983,466	-		PFLU_RS13195	0.53	+0.2
2,983,466	-		PFLU_RS13195	0.53	+0.3
2,983,466	-		PFLU_RS13195	0.53	+0.2
2,983,466	-		PFLU_RS13195	0.53	+0.2
2,983,466	-		PFLU_RS13195	0.53	-0.1
2,983,467	+		PFLU_RS13195	0.53	-0.0
2,983,467	+		PFLU_RS13195	0.53	+1.9
2,983,468	-		PFLU_RS13195	0.53	-0.3
2,983,468	-		PFLU_RS13195	0.53	-1.6
2,983,468	-		PFLU_RS13195	0.53	+0.6
2,983,468	-		PFLU_RS13195	0.53	+0.1
2,983,468	-		PFLU_RS13195	0.53	+1.0
2,983,468	-		PFLU_RS13195	0.53	+0.0
2,983,468	-		PFLU_RS13195	0.53	+1.1
2,983,468	-		PFLU_RS13195	0.53	-1.2
2,983,468	-		PFLU_RS13195	0.53	-0.4
2,983,722	+		PFLU_RS13195	0.58	-0.1
2,983,723	-		PFLU_RS13195	0.58	+0.5
2,983,860	-		PFLU_RS13195	0.61	+0.8
2,983,860	-		PFLU_RS13195	0.61	-0.3
2,983,943	-		PFLU_RS13195	0.62	+0.8
2,984,043	+		PFLU_RS13195	0.64	+1.0
2,984,175	-		PFLU_RS13195	0.67	+0.5
2,984,219	-		PFLU_RS13195	0.68	+0.3
2,984,298	+		PFLU_RS13195	0.69	-1.3
2,984,355	-		PFLU_RS13195	0.70	+1.6
2,984,493	+		PFLU_RS13195	0.73	-1.1
2,984,493	+		PFLU_RS13195	0.73	+1.0
2,984,493	+		PFLU_RS13195	0.73	-2.7
2,984,493	+		PFLU_RS13195	0.73	-0.2
2,984,493	+		PFLU_RS13195	0.73	-1.5
2,984,493	+		PFLU_RS13195	0.73	-1.1
2,984,493	+		PFLU_RS13195	0.73	+0.6
2,984,493	+		PFLU_RS13195	0.73	-1.1
2,984,493	+		PFLU_RS13195	0.73	-0.5
2,984,493	+		PFLU_RS13195	0.73	+0.4
2,984,493	+		PFLU_RS13195	0.73	+1.0
2,984,494	-		PFLU_RS13195	0.73	-0.4
2,984,494	-		PFLU_RS13195	0.73	+1.0
2,984,494	-		PFLU_RS13195	0.73	+0.2
2,984,494	-		PFLU_RS13195	0.73	-3.3
2,984,494	-		PFLU_RS13195	0.73	+0.2
2,984,494	-		PFLU_RS13195	0.73	+0.5
2,984,494	-		PFLU_RS13195	0.73	+1.2
2,984,494	-		PFLU_RS13195	0.73	-0.4
2,984,516	-		PFLU_RS13195	0.74	+0.0
2,984,623	+		PFLU_RS13195	0.76	-2.7
2,984,623	+		PFLU_RS13195	0.76	-1.4
2,984,623	+		PFLU_RS13195	0.76	+0.2
2,984,623	+		PFLU_RS13195	0.76	-1.3
2,984,623	+		PFLU_RS13195	0.76	-1.7
2,984,624	-		PFLU_RS13195	0.76	-0.3
2,984,624	-		PFLU_RS13195	0.76	-0.2
2,984,624	-		PFLU_RS13195	0.76	-2.9
2,984,624	-		PFLU_RS13195	0.76	-0.7
2,984,631	+		PFLU_RS13195	0.76	-1.4
2,984,631	+		PFLU_RS13195	0.76	+1.1
2,984,631	+		PFLU_RS13195	0.76	-1.2
2,984,631	+		PFLU_RS13195	0.76	-0.2
2,984,632	-		PFLU_RS13195	0.76	+0.6
2,984,632	-		PFLU_RS13195	0.76	+0.6
2,984,647	-		PFLU_RS13195	0.76	-1.1
2,984,927	+		PFLU_RS13195	0.82	-1.0
2,984,928	-		PFLU_RS13195	0.82	+0.8
2,984,928	-		PFLU_RS13195	0.82	-1.4
2,984,928	-		PFLU_RS13195	0.82	+0.0
2,984,928	-		PFLU_RS13195	0.82	-0.6
2,985,106	-		PFLU_RS13195	0.85	+0.7
2,985,106	-		PFLU_RS13195	0.85	+0.4
2,985,106	-		PFLU_RS13195	0.85	+1.8
2,985,592	+				-0.3
2,985,592	+				+0.0
2,985,592	+				+0.6
2,985,592	+				+0.7
2,985,593	-				-0.1
2,985,594	+				+0.4
2,985,595	-				-0.2
2,985,595	-				+0.0
2,985,595	-				-0.0
2,985,612	+				+0.5
2,985,840	+				+0.3
2,985,851	+				+0.1
2,985,851	+				-0.2
2,985,852	-				-0.2
2,985,874	+				-0.2
2,985,948	+				-0.7
2,985,948	+				+0.1
2,985,948	+				+0.3
2,985,948	+				+0.5
2,985,948	+				+0.7
2,985,949	-				-2.1
2,985,949	-				-0.8
2,985,949	-				+0.2
2,985,949	-				-0.2
2,985,952	+				-0.6
2,985,952	+				-0.5
2,985,952	+				+0.6
2,985,952	+				+0.1
2,985,952	+				+0.6
2,985,952	+				+0.7
2,985,952	+				+0.1
2,985,952	+				+0.7
2,985,952	+				+0.9
2,985,952	+				-0.3
2,985,952	+				-0.7
2,985,953	-				-0.5
2,985,953	-				-1.5
2,985,953	-				+0.3
2,985,953	-				-1.6
2,985,953	-				-0.1
2,985,953	-				+0.4
2,985,953	-				-0.0
2,985,953	-				-0.4
2,985,953	-				-1.0
2,985,953	-				-1.1
2,985,953	-				+0.4
2,985,953	-				+0.8
2,986,029	+				-0.1
2,986,030	-				+0.0
2,986,049	+				-0.0
2,986,053	+				+0.3
2,986,054	-				+0.5
2,986,054	-				-2.5
2,986,064	+				+0.5
2,986,065	-				+0.8
2,986,065	-				-1.0
2,986,065	-				-1.3
2,986,065	-				-0.5
2,986,187	+		PFLU_RS13200	0.11	-0.0
2,986,258	+		PFLU_RS13200	0.18	-1.0