Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS07700

Experiment: D,L-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate (C)
1,711,120	+		PFLU_RS07695	0.37	+0.6
1,711,120	+		PFLU_RS07695	0.37	+0.3
1,711,120	+		PFLU_RS07695	0.37	-1.3
1,711,120	+		PFLU_RS07695	0.37	-0.4
1,711,120	+		PFLU_RS07695	0.37	-1.5
1,711,121	-		PFLU_RS07695	0.37	+1.0
1,711,121	-		PFLU_RS07695	0.37	+1.1
1,711,121	-		PFLU_RS07695	0.37	-2.2
1,711,121	-		PFLU_RS07695	0.37	+0.2
1,711,121	-		PFLU_RS07695	0.37	-0.0
1,711,390	+		PFLU_RS07695	0.64	+0.1
1,711,391	-		PFLU_RS07695	0.64	+0.9
1,711,405	-		PFLU_RS07695	0.65	-0.2
1,711,690	+				-0.2
1,711,690	+				-0.2
1,711,690	+				-0.0
1,711,690	+				-0.9
1,711,690	+				-1.6
1,711,690	+				+0.1
1,711,690	+				+0.3
1,711,690	+				-1.6
1,711,723	-				-1.2
1,711,808	+				+0.4
1,711,808	+				-1.6
1,711,808	+				+1.8
1,711,808	+				+0.7
1,711,809	-				+0.1
1,711,809	-				+0.4
1,711,916	-				-0.7
1,711,916	-				-0.6
1,711,948	+				+1.4
1,711,948	+				+0.1
1,711,948	+				-0.9
1,711,948	+				+0.9
1,711,948	+				-0.1
1,711,949	-				-0.1
1,711,949	-				-1.1
1,711,949	-				-0.3
1,711,949	-				-0.1
1,711,949	-				+0.2
1,711,949	-				+0.3
1,711,949	-				+0.6
1,712,040	+				+0.2
1,712,040	+				+0.3
1,712,040	+				-0.1
1,712,040	+				-1.1
1,712,041	-				+0.5
1,712,041	-				-0.0
1,712,041	-				+1.7
1,712,041	-				+0.4
1,712,041	-				-1.4
1,712,124	+				-0.4
1,712,124	+				+1.2
1,712,162	+		PFLU_RS07700	0.11	+0.4
1,712,162	+		PFLU_RS07700	0.11	-2.4
1,712,162	+		PFLU_RS07700	0.11	-0.2
1,712,163	-		PFLU_RS07700	0.11	-0.1
1,712,163	-		PFLU_RS07700	0.11	-1.4
1,712,163	-		PFLU_RS07700	0.11	-1.2
1,712,265	+		PFLU_RS07700	0.15	+0.2
1,712,266	-		PFLU_RS07700	0.15	+0.2
1,712,285	-		PFLU_RS07700	0.15	+1.7
1,712,566	-		PFLU_RS07700	0.26	+0.1
1,712,699	+		PFLU_RS07700	0.31	-2.0
1,712,699	+		PFLU_RS07700	0.31	+1.4
1,712,699	+		PFLU_RS07700	0.31	+0.8
1,712,699	+		PFLU_RS07700	0.31	+0.5
1,712,700	-		PFLU_RS07700	0.31	-0.1
1,712,700	-		PFLU_RS07700	0.31	+0.9
1,712,700	-		PFLU_RS07700	0.31	+0.6
1,712,700	-		PFLU_RS07700	0.31	-0.7
1,712,700	-		PFLU_RS07700	0.31	+0.1
1,712,700	-		PFLU_RS07700	0.31	-0.2
1,712,700	-		PFLU_RS07700	0.31	+1.1
1,712,904	+		PFLU_RS07700	0.38	-0.8
1,712,904	+		PFLU_RS07700	0.38	+0.9
1,712,904	+		PFLU_RS07700	0.38	-0.6
1,712,904	+		PFLU_RS07700	0.38	-0.0
1,712,904	+		PFLU_RS07700	0.38	-1.8
1,712,905	-		PFLU_RS07700	0.38	+0.6
1,712,905	-		PFLU_RS07700	0.38	+0.8
1,712,905	-		PFLU_RS07700	0.38	+0.7
1,712,905	-		PFLU_RS07700	0.38	+0.4
1,712,905	-		PFLU_RS07700	0.38	+0.1
1,712,979	+		PFLU_RS07700	0.41	-0.9
1,712,979	+		PFLU_RS07700	0.41	+0.9
1,712,979	+		PFLU_RS07700	0.41	-1.2
1,712,979	+		PFLU_RS07700	0.41	+0.1
1,712,980	-		PFLU_RS07700	0.41	-0.4
1,712,980	-		PFLU_RS07700	0.41	-1.0
1,712,980	-		PFLU_RS07700	0.41	-2.8
1,712,980	-		PFLU_RS07700	0.41	+0.4
1,713,000	+		PFLU_RS07700	0.42	+0.4
1,713,000	+		PFLU_RS07700	0.42	-0.3
1,713,001	-		PFLU_RS07700	0.42	-1.6
1,713,001	-		PFLU_RS07700	0.42	+0.7
1,713,001	-		PFLU_RS07700	0.42	-0.9
1,713,008	+		PFLU_RS07700	0.42	-0.0
1,713,008	+		PFLU_RS07700	0.42	+0.7
1,713,008	+		PFLU_RS07700	0.42	+1.1
1,713,008	+		PFLU_RS07700	0.42	+0.7
1,713,008	+		PFLU_RS07700	0.42	-1.0
1,713,008	+		PFLU_RS07700	0.42	+1.0
1,713,009	-		PFLU_RS07700	0.42	-0.6
1,713,009	-		PFLU_RS07700	0.42	-0.5
1,713,009	-		PFLU_RS07700	0.42	+0.4
1,713,009	-		PFLU_RS07700	0.42	-1.1
1,713,016	+		PFLU_RS07700	0.43	-0.1
1,713,097	+		PFLU_RS07700	0.46	-0.4
1,713,097	+		PFLU_RS07700	0.46	-0.1
1,713,097	+		PFLU_RS07700	0.46	-1.2
1,713,098	-		PFLU_RS07700	0.46	-0.2
1,713,098	-		PFLU_RS07700	0.46	+0.4
1,713,098	-		PFLU_RS07700	0.46	+0.7
1,713,169	+		PFLU_RS07700	0.48	-0.1
1,713,170	-		PFLU_RS07700	0.48	-0.2
1,713,170	-		PFLU_RS07700	0.48	+0.3
1,713,170	-		PFLU_RS07700	0.48	-0.6
1,713,170	-		PFLU_RS07700	0.48	+0.0
1,713,170	-		PFLU_RS07700	0.48	-2.6
1,713,218	+		PFLU_RS07700	0.50	-1.0
1,713,218	+		PFLU_RS07700	0.50	+0.2
1,713,219	-		PFLU_RS07700	0.50	-0.7
1,713,219	-		PFLU_RS07700	0.50	+0.4
1,713,219	-		PFLU_RS07700	0.50	+0.6
1,713,277	-		PFLU_RS07700	0.52	-0.8
1,713,465	+		PFLU_RS07700	0.59	-0.4
1,713,465	+		PFLU_RS07700	0.59	-0.5
1,713,465	+		PFLU_RS07700	0.59	-0.7
1,713,465	+		PFLU_RS07700	0.59	+1.1
1,713,466	-		PFLU_RS07700	0.59	+0.1
1,713,466	-		PFLU_RS07700	0.59	+0.9
1,713,466	-		PFLU_RS07700	0.59	-0.6
1,713,466	-		PFLU_RS07700	0.59	-0.3
1,713,466	-		PFLU_RS07700	0.59	+0.9
1,713,564	-		PFLU_RS07700	0.63	-0.9
1,713,564	-		PFLU_RS07700	0.63	+0.3
1,713,810	-		PFLU_RS07700	0.72	-1.1
1,714,038	+		PFLU_RS07700	0.81	+0.7
1,714,038	+		PFLU_RS07700	0.81	-0.8
1,714,038	+		PFLU_RS07700	0.81	-0.9
1,714,038	+		PFLU_RS07700	0.81	+1.0
1,714,038	+		PFLU_RS07700	0.81	-1.1
1,714,038	+		PFLU_RS07700	0.81	+0.2
1,714,038	+		PFLU_RS07700	0.81	+1.6
1,714,038	+		PFLU_RS07700	0.81	+0.2
1,714,038	+		PFLU_RS07700	0.81	-0.5
1,714,038	+		PFLU_RS07700	0.81	-1.3
1,714,038	+		PFLU_RS07700	0.81	+0.5
1,714,038	+		PFLU_RS07700	0.81	-0.9
1,714,038	+		PFLU_RS07700	0.81	+0.8
1,714,038	+		PFLU_RS07700	0.81	-0.6
1,714,038	+		PFLU_RS07700	0.81	+0.1
1,714,039	-		PFLU_RS07700	0.81	-0.0
1,714,039	-		PFLU_RS07700	0.81	-3.1
1,714,039	-		PFLU_RS07700	0.81	-0.7
1,714,039	-		PFLU_RS07700	0.81	+0.4
1,714,039	-		PFLU_RS07700	0.81	-0.9
1,714,039	-		PFLU_RS07700	0.81	+0.9
1,714,039	-		PFLU_RS07700	0.81	+0.2
1,714,039	-		PFLU_RS07700	0.81	-0.3
1,714,039	-		PFLU_RS07700	0.81	+0.6
1,714,039	-		PFLU_RS07700	0.81	+0.5
1,714,039	-		PFLU_RS07700	0.81	-0.5
1,714,039	-		PFLU_RS07700	0.81	-1.5
1,714,039	-		PFLU_RS07700	0.81	-0.9
1,714,039	-		PFLU_RS07700	0.81	+0.1
1,714,039	-		PFLU_RS07700	0.81	+0.9
1,714,039	-		PFLU_RS07700	0.81	+1.4
1,714,050	+		PFLU_RS07700	0.81	+1.1
1,714,050	+		PFLU_RS07700	0.81	+1.1
1,714,050	+		PFLU_RS07700	0.81	+0.0
1,714,050	+		PFLU_RS07700	0.81	+1.0
1,714,051	-		PFLU_RS07700	0.81	-0.7
1,714,051	-		PFLU_RS07700	0.81	-0.2
1,714,051	-		PFLU_RS07700	0.81	-0.9
1,714,083	+		PFLU_RS07700	0.82	-0.6
1,714,083	+		PFLU_RS07700	0.82	-0.2
1,714,083	+		PFLU_RS07700	0.82	-1.3
1,714,083	+		PFLU_RS07700	0.82	+0.2
1,714,084	-		PFLU_RS07700	0.82	+0.4
1,714,084	-		PFLU_RS07700	0.82	+0.6
1,714,084	-		PFLU_RS07700	0.82	+0.9
1,714,084	-		PFLU_RS07700	0.82	+0.1
1,714,160	+		PFLU_RS07700	0.85	+0.1
1,714,160	+		PFLU_RS07700	0.85	+1.1
1,714,160	+		PFLU_RS07700	0.85	-0.6
1,714,160	+		PFLU_RS07700	0.85	-0.9
1,714,160	+		PFLU_RS07700	0.85	+0.6
1,714,160	+		PFLU_RS07700	0.85	-1.2
1,714,160	+		PFLU_RS07700	0.85	-0.2
1,714,160	+		PFLU_RS07700	0.85	+0.4
1,714,161	-		PFLU_RS07700	0.85	-1.2
1,714,161	-		PFLU_RS07700	0.85	-0.4
1,714,161	-		PFLU_RS07700	0.85	+0.6
1,714,161	-		PFLU_RS07700	0.85	+0.2
1,714,161	-		PFLU_RS07700	0.85	+1.0
1,714,161	-		PFLU_RS07700	0.85	+0.5
1,714,161	-		PFLU_RS07700	0.85	+1.0
1,714,324	+				-0.8
1,714,324	+				+0.9
1,714,324	+				+0.0
1,714,324	+				-0.1
1,714,324	+				-1.0
1,714,325	-				-0.1
1,714,473	+				+0.3
1,714,662	+		PFLU_RS07705	0.16	+0.7
1,714,662	+		PFLU_RS07705	0.16	+0.1
1,714,662	+		PFLU_RS07705	0.16	-0.4
1,714,662	+		PFLU_RS07705	0.16	-0.4
1,714,662	+		PFLU_RS07705	0.16	-0.9
1,714,662	+		PFLU_RS07705	0.16	-0.3
1,714,662	+		PFLU_RS07705	0.16	-0.3
1,714,662	+		PFLU_RS07705	0.16	-0.0
1,714,663	-		PFLU_RS07705	0.16	+0.1
1,714,663	-		PFLU_RS07705	0.16	-0.8
1,714,663	-		PFLU_RS07705	0.16	-0.3
1,714,663	-		PFLU_RS07705	0.16	-0.1
1,714,732	+		PFLU_RS07705	0.28	+2.1
1,714,732	+		PFLU_RS07705	0.28	-0.3
1,714,732	+		PFLU_RS07705	0.28	+1.2
1,714,732	+		PFLU_RS07705	0.28	-0.2
1,714,732	+		PFLU_RS07705	0.28	-1.4
1,714,733	-		PFLU_RS07705	0.29	-0.2
1,714,908	+		PFLU_RS07705	0.59	-0.1
1,714,908	+		PFLU_RS07705	0.59	+0.1
1,714,908	+		PFLU_RS07705	0.59	+0.9
1,714,908	+		PFLU_RS07705	0.59	-1.7
1,714,908	+		PFLU_RS07705	0.59	-0.9
1,714,909	-		PFLU_RS07705	0.60	-0.3
1,714,909	-		PFLU_RS07705	0.60	+1.5
1,714,909	-		PFLU_RS07705	0.60	+0.1
1,714,909	-		PFLU_RS07705	0.60	+0.2
1,715,193	+				-0.2
1,715,193	+				-0.6
1,715,193	+				-0.5
1,715,193	+				-0.9
1,715,193	+				-0.7
1,715,193	+				-0.7
1,715,193	+				+0.1
1,715,193	+				-0.5
1,715,194	-				+0.5
1,715,194	-				+1.0
1,715,194	-				+0.1
1,715,194	-				+0.3
1,715,194	-				-2.3
1,715,196	+				+0.3
1,715,196	+				-1.2
1,715,196	+				+0.3
1,715,197	-				-1.8
1,715,197	-				+0.5
1,715,197	-				-0.5
1,715,197	-				+0.9
1,715,197	-				-0.2
1,715,244	+				-0.9
1,715,245	-				-0.5
1,715,513	+		PFLU_RS07710	0.11	-0.1
1,715,546	+		PFLU_RS07710	0.12	+0.3
1,715,546	+		PFLU_RS07710	0.12	-0.6
1,715,546	+		PFLU_RS07710	0.12	+0.7
1,715,547	-		PFLU_RS07710	0.12	+1.5
1,715,547	-		PFLU_RS07710	0.12	+0.5
1,715,547	-		PFLU_RS07710	0.12	-0.3