Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS30075

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
6,686,342	+		PFLU_RS30065	0.59	-1.4
6,686,414	+		PFLU_RS30065	0.64	+0.4
6,686,415	-		PFLU_RS30065	0.65	-0.8
6,686,415	-		PFLU_RS30065	0.65	+0.9
6,686,518	+		PFLU_RS30065	0.72	-0.1
6,686,579	-		PFLU_RS30065	0.77	+0.3
6,686,579	-		PFLU_RS30065	0.77	-2.1
6,686,717	+		PFLU_RS30065	0.88	-1.0
6,686,903	-				-1.5
6,686,903	-				+0.4
6,686,933	-		PFLU_RS30070	0.15	-0.2
6,687,002	+		PFLU_RS30070	0.31	+0.1
6,687,003	-		PFLU_RS30070	0.31	+0.5
6,687,003	-		PFLU_RS30070	0.31	+1.3
6,687,003	-		PFLU_RS30070	0.31	+1.2
6,687,033	-		PFLU_RS30070	0.38	+1.3
6,687,054	+		PFLU_RS30070	0.43	+0.3
6,687,054	+		PFLU_RS30070	0.43	-1.4
6,687,055	-		PFLU_RS30070	0.43	+0.7
6,687,055	-		PFLU_RS30070	0.43	-0.4
6,687,055	-		PFLU_RS30070	0.43	-0.2
6,687,055	-		PFLU_RS30070	0.43	+0.1
6,687,347	+				-0.6
6,687,347	+				-0.9
6,687,348	-				+1.3
6,687,348	-				+0.6
6,687,348	-				-3.0
6,687,354	-				-0.1
6,687,354	-				+0.8
6,687,354	-				-1.6
6,687,354	-				-1.0
6,687,423	+		PFLU_RS30075	0.17	+0.1
6,687,423	+		PFLU_RS30075	0.17	-0.6
6,687,423	+		PFLU_RS30075	0.17	+0.9
6,687,423	+		PFLU_RS30075	0.17	-0.4
6,687,423	+		PFLU_RS30075	0.17	+0.7
6,687,423	+		PFLU_RS30075	0.17	+0.2
6,687,423	+		PFLU_RS30075	0.17	-1.9
6,687,423	+		PFLU_RS30075	0.17	-1.0
6,687,424	-		PFLU_RS30075	0.17	+0.1
6,687,424	-		PFLU_RS30075	0.17	+0.0
6,687,424	-		PFLU_RS30075	0.17	-1.0
6,687,424	-		PFLU_RS30075	0.17	+0.2
6,687,424	-		PFLU_RS30075	0.17	+0.9
6,687,530	+		PFLU_RS30075	0.34	-2.4
6,687,530	+		PFLU_RS30075	0.34	+1.0
6,687,550	-		PFLU_RS30075	0.37	+0.1
6,687,550	-		PFLU_RS30075	0.37	-0.3
6,687,632	+		PFLU_RS30075	0.51	+0.8
6,687,723	+		PFLU_RS30075	0.65	-0.9
6,687,723	+		PFLU_RS30075	0.65	-0.2
6,687,723	+		PFLU_RS30075	0.65	+0.4
6,687,723	+		PFLU_RS30075	0.65	-0.4
6,687,724	-		PFLU_RS30075	0.65	+0.4
6,687,724	-		PFLU_RS30075	0.65	-0.8
6,687,724	-		PFLU_RS30075	0.65	-0.7
6,687,724	-		PFLU_RS30075	0.65	+0.1
6,687,724	-		PFLU_RS30075	0.65	+1.0
6,687,742	-		PFLU_RS30075	0.68	+0.3
6,688,150	+		PFLU_RS30080	0.23	+0.9
6,688,151	-		PFLU_RS30080	0.23	-2.2
6,688,165	+		PFLU_RS30080	0.24	-0.0
6,688,166	-		PFLU_RS30080	0.24	+0.2
6,688,237	+		PFLU_RS30080	0.32	+0.4
6,688,238	-		PFLU_RS30080	0.32	-0.1
6,688,238	-		PFLU_RS30080	0.32	+0.6
6,688,258	+		PFLU_RS30080	0.34	+1.2
6,688,258	+		PFLU_RS30080	0.34	-1.3
6,688,258	+		PFLU_RS30080	0.34	-0.0
6,688,258	+		PFLU_RS30080	0.34	-0.0
6,688,258	+		PFLU_RS30080	0.34	+0.4
6,688,259	-		PFLU_RS30080	0.34	-0.1
6,688,259	-		PFLU_RS30080	0.34	+0.7
6,688,259	-		PFLU_RS30080	0.34	+0.1
6,688,259	-		PFLU_RS30080	0.34	+0.7
6,688,259	-		PFLU_RS30080	0.34	-0.8
6,688,259	-		PFLU_RS30080	0.34	+1.1
6,688,270	+		PFLU_RS30080	0.35	+0.5
6,688,270	+		PFLU_RS30080	0.35	-0.4
6,688,270	+		PFLU_RS30080	0.35	+1.5
6,688,271	-		PFLU_RS30080	0.35	-1.5
6,688,271	-		PFLU_RS30080	0.35	-0.3
6,688,271	-		PFLU_RS30080	0.35	+0.3
6,688,312	+		PFLU_RS30080	0.40	+0.1
6,688,312	+		PFLU_RS30080	0.40	+0.5
6,688,312	+		PFLU_RS30080	0.40	-0.8
6,688,312	+		PFLU_RS30080	0.40	-1.7
6,688,312	+		PFLU_RS30080	0.40	-0.7
6,688,312	+		PFLU_RS30080	0.40	+1.0
6,688,312	+		PFLU_RS30080	0.40	-0.0
6,688,312	+		PFLU_RS30080	0.40	+0.8
6,688,312	+		PFLU_RS30080	0.40	-0.6
6,688,312	+		PFLU_RS30080	0.40	+0.1
6,688,312	+		PFLU_RS30080	0.40	-0.2
6,688,312	+		PFLU_RS30080	0.40	-0.0
6,688,313	-		PFLU_RS30080	0.40	+0.9
6,688,313	-		PFLU_RS30080	0.40	+1.0
6,688,313	-		PFLU_RS30080	0.40	+0.1
6,688,313	-		PFLU_RS30080	0.40	+0.3
6,688,313	-		PFLU_RS30080	0.40	+0.8
6,688,313	-		PFLU_RS30080	0.40	+1.1
6,688,313	-		PFLU_RS30080	0.40	+0.3
6,688,313	-		PFLU_RS30080	0.40	+1.3
6,688,462	+		PFLU_RS30080	0.56	-1.1
6,688,493	-		PFLU_RS30080	0.59	+0.9
6,688,531	+		PFLU_RS30080	0.63	+0.1
6,688,531	+		PFLU_RS30080	0.63	-0.5
6,688,531	+		PFLU_RS30080	0.63	+0.3
6,688,531	+		PFLU_RS30080	0.63	+0.1
6,688,531	+		PFLU_RS30080	0.63	-0.4
6,688,531	+		PFLU_RS30080	0.63	-0.8
6,688,532	-		PFLU_RS30080	0.63	-0.3
6,688,532	-		PFLU_RS30080	0.63	+1.2
6,688,532	-		PFLU_RS30080	0.63	-0.7
6,688,532	-		PFLU_RS30080	0.63	+0.2
6,688,532	-		PFLU_RS30080	0.63	-0.7
6,688,532	-		PFLU_RS30080	0.63	-0.2
6,688,532	-		PFLU_RS30080	0.63	-0.4
6,688,532	-		PFLU_RS30080	0.63	+0.5
6,688,532	-		PFLU_RS30080	0.63	+1.1
6,688,532	-		PFLU_RS30080	0.63	+0.5
6,688,532	-		PFLU_RS30080	0.63	-0.3
6,688,532	-		PFLU_RS30080	0.63	-0.8
6,688,532	-		PFLU_RS30080	0.63	+0.2
6,688,776	+		PFLU_RS30080	0.90	-0.1
6,688,776	+		PFLU_RS30080	0.90	+0.6
6,688,776	+		PFLU_RS30080	0.90	+0.4
6,688,776	+		PFLU_RS30080	0.90	+1.0
6,688,776	+		PFLU_RS30080	0.90	-0.1
6,688,776	+		PFLU_RS30080	0.90	-0.1
6,688,776	+		PFLU_RS30080	0.90	+0.3
6,688,776	+		PFLU_RS30080	0.90	-0.6
6,688,776	+		PFLU_RS30080	0.90	+0.8
6,688,777	-		PFLU_RS30080	0.90	-0.7
6,688,777	-		PFLU_RS30080	0.90	-1.5
6,688,777	-		PFLU_RS30080	0.90	+0.9
6,688,777	-		PFLU_RS30080	0.90	+0.5
6,688,777	-		PFLU_RS30080	0.90	+1.2
6,688,777	-		PFLU_RS30080	0.90	-1.8
6,688,777	-		PFLU_RS30080	0.90	-0.3
6,688,777	-		PFLU_RS30080	0.90	-1.5
6,688,777	-		PFLU_RS30080	0.90	+0.7
6,688,777	-		PFLU_RS30080	0.90	+0.3
6,688,859	-				+0.5
6,688,885	-				-0.5
6,688,894	+				-0.2
6,688,895	-				+0.1
6,688,895	-				+0.4
6,688,895	-				-0.6
6,688,895	-				+0.5