Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS29685

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
6,595,094	+		PFLU_RS29675	0.86	-0.6
6,595,094	+		PFLU_RS29675	0.86	+0.2
6,595,094	+		PFLU_RS29675	0.86	+0.6
6,595,094	+		PFLU_RS29675	0.86	-1.9
6,595,094	+		PFLU_RS29675	0.86	-0.5
6,595,095	-		PFLU_RS29675	0.86	+0.5
6,595,095	-		PFLU_RS29675	0.86	-0.1
6,595,133	+		PFLU_RS29675	0.86	+0.1
6,595,134	-		PFLU_RS29675	0.86	+1.0
6,595,160	+		PFLU_RS29675	0.87	-0.1
6,595,161	-		PFLU_RS29675	0.87	+0.5
6,595,161	-		PFLU_RS29675	0.87	-0.5
6,595,161	-		PFLU_RS29675	0.87	+0.2
6,595,161	-		PFLU_RS29675	0.87	-0.0
6,595,161	-		PFLU_RS29675	0.87	-0.8
6,595,178	+		PFLU_RS29675	0.87	-0.0
6,595,178	+		PFLU_RS29675	0.87	+0.3
6,595,179	-		PFLU_RS29675	0.87	-0.3
6,595,179	-		PFLU_RS29675	0.87	+0.9
6,595,179	-		PFLU_RS29675	0.87	-0.9
6,595,244	+		PFLU_RS29675	0.89	-1.0
6,595,245	-		PFLU_RS29675	0.89	-0.5
6,595,250	+		PFLU_RS29675	0.89	+0.4
6,595,251	-		PFLU_RS29675	0.89	+0.2
6,595,251	-		PFLU_RS29675	0.89	-0.4
6,595,340	+				-2.2
6,595,415	+				+0.3
6,595,416	-				-0.1
6,595,416	-				+1.2
6,595,416	-				+0.3
6,595,442	+				-1.9
6,595,442	+				+1.0
6,595,443	-				-0.8
6,595,443	-				-0.3
6,595,443	-				-0.4
6,595,541	-				-0.6
6,595,581	+				+0.6
6,595,581	+				+1.0
6,595,582	-				-0.3
6,595,594	+				-1.2
6,595,595	-				-1.3
6,595,595	-				+0.6
6,595,616	+				-0.7
6,595,616	+				+0.3
6,595,617	-				+0.7
6,595,617	-				+1.1
6,595,617	-				-1.0
6,595,661	+				-1.0
6,595,662	-				+0.3
6,595,796	-		PFLU_RS29680	0.22	-0.2
6,595,796	-		PFLU_RS29680	0.22	+0.3
6,595,796	-		PFLU_RS29680	0.22	+0.1
6,596,339	+				+1.3
6,596,339	+				-1.9
6,596,388	+				+0.5
6,596,518	+				+0.9
6,596,518	+				+0.4
6,596,518	+				+0.6
6,596,518	+				+0.2
6,596,519	-				+0.0
6,596,519	-				+0.0
6,596,562	+		PFLU_RS29685	0.11	-0.1
6,596,715	+		PFLU_RS29685	0.14	+2.0
6,596,715	+		PFLU_RS29685	0.14	-1.4
6,597,070	+		PFLU_RS29685	0.23	-2.2
6,597,070	+		PFLU_RS29685	0.23	-0.6
6,597,070	+		PFLU_RS29685	0.23	-0.8
6,597,070	+		PFLU_RS29685	0.23	+0.2
6,597,071	-		PFLU_RS29685	0.23	+1.4
6,597,071	-		PFLU_RS29685	0.23	-1.5
6,597,071	-		PFLU_RS29685	0.23	+0.8
6,597,127	+		PFLU_RS29685	0.24	+1.0
6,597,127	+		PFLU_RS29685	0.24	+0.1
6,597,127	+		PFLU_RS29685	0.24	+0.1
6,597,128	-		PFLU_RS29685	0.24	+0.0
6,597,128	-		PFLU_RS29685	0.24	-0.1
6,597,128	-		PFLU_RS29685	0.24	+0.0
6,597,128	-		PFLU_RS29685	0.24	+0.8
6,597,128	-		PFLU_RS29685	0.24	-0.5
6,597,128	-		PFLU_RS29685	0.24	+0.7
6,597,141	-		PFLU_RS29685	0.24	-1.0
6,597,141	-		PFLU_RS29685	0.24	-1.0
6,597,141	-		PFLU_RS29685	0.24	+0.8
6,597,141	-		PFLU_RS29685	0.24	-1.7
6,597,181	+		PFLU_RS29685	0.25	+1.4
6,597,181	+		PFLU_RS29685	0.25	-0.2
6,597,181	+		PFLU_RS29685	0.25	+0.2
6,597,181	+		PFLU_RS29685	0.25	-0.0
6,597,181	+		PFLU_RS29685	0.25	-0.6
6,597,181	+		PFLU_RS29685	0.25	-0.8
6,597,181	+		PFLU_RS29685	0.25	+0.3
6,597,181	+		PFLU_RS29685	0.25	+0.2
6,597,182	-		PFLU_RS29685	0.25	+0.8
6,597,182	-		PFLU_RS29685	0.25	-0.8
6,597,182	-		PFLU_RS29685	0.25	-1.0
6,597,182	-		PFLU_RS29685	0.25	+0.0
6,597,182	-		PFLU_RS29685	0.25	+2.0
6,597,182	-		PFLU_RS29685	0.25	+0.5
6,597,239	+		PFLU_RS29685	0.26	+0.4
6,597,314	+		PFLU_RS29685	0.28	+0.8
6,597,314	+		PFLU_RS29685	0.28	-1.3
6,597,314	+		PFLU_RS29685	0.28	+0.8
6,597,314	+		PFLU_RS29685	0.28	+0.5
6,597,315	-		PFLU_RS29685	0.28	-1.4
6,597,399	+		PFLU_RS29685	0.30	-1.4
6,597,400	-		PFLU_RS29685	0.30	+0.4
6,597,406	+		PFLU_RS29685	0.30	+0.1
6,597,406	+		PFLU_RS29685	0.30	-0.8
6,597,407	-		PFLU_RS29685	0.30	+0.9
6,597,407	-		PFLU_RS29685	0.30	-0.8
6,597,407	-		PFLU_RS29685	0.30	+0.5
6,597,407	-		PFLU_RS29685	0.30	+0.5
6,597,417	-		PFLU_RS29685	0.31	-0.1
6,597,417	-		PFLU_RS29685	0.31	-1.3
6,597,428	+		PFLU_RS29685	0.31	-0.7
6,597,429	-		PFLU_RS29685	0.31	-0.3
6,597,429	-		PFLU_RS29685	0.31	+0.4
6,597,429	-		PFLU_RS29685	0.31	+0.2
6,597,429	-		PFLU_RS29685	0.31	-0.3
6,597,441	+		PFLU_RS29685	0.31	-0.7
6,597,441	+		PFLU_RS29685	0.31	+0.8
6,597,442	-		PFLU_RS29685	0.31	-0.4
6,597,470	+		PFLU_RS29685	0.32	-0.7
6,597,470	+		PFLU_RS29685	0.32	+0.5
6,597,471	-		PFLU_RS29685	0.32	-1.0
6,597,471	-		PFLU_RS29685	0.32	+0.9
6,597,471	-		PFLU_RS29685	0.32	-1.8
6,597,471	-		PFLU_RS29685	0.32	+0.1
6,597,613	+		PFLU_RS29685	0.35	+1.4
6,597,670	+		PFLU_RS29685	0.36	-0.9
6,597,670	+		PFLU_RS29685	0.36	+0.4
6,597,670	+		PFLU_RS29685	0.36	+0.2
6,597,670	+		PFLU_RS29685	0.36	+0.2
6,597,670	+		PFLU_RS29685	0.36	-0.7
6,597,670	+		PFLU_RS29685	0.36	-0.0
6,597,670	+		PFLU_RS29685	0.36	-0.4
6,597,671	-		PFLU_RS29685	0.36	-0.3
6,597,671	-		PFLU_RS29685	0.36	-0.4
6,597,671	-		PFLU_RS29685	0.36	+0.0
6,597,739	+		PFLU_RS29685	0.38	-1.2
6,597,740	-		PFLU_RS29685	0.38	-0.3
6,597,740	-		PFLU_RS29685	0.38	+0.3
6,597,740	-		PFLU_RS29685	0.38	-0.2
6,597,740	-		PFLU_RS29685	0.38	-0.8
6,597,751	+		PFLU_RS29685	0.38	+0.1
6,597,752	-		PFLU_RS29685	0.38	-0.9
6,597,842	-		PFLU_RS29685	0.40	+1.0
6,597,842	-		PFLU_RS29685	0.40	-0.5
6,597,928	+		PFLU_RS29685	0.42	+0.3
6,597,928	+		PFLU_RS29685	0.42	-0.8
6,597,929	-		PFLU_RS29685	0.42	+1.1
6,597,929	-		PFLU_RS29685	0.42	-0.0
6,597,929	-		PFLU_RS29685	0.42	+0.4
6,597,929	-		PFLU_RS29685	0.42	-0.4
6,597,934	+		PFLU_RS29685	0.42	-0.2
6,597,934	+		PFLU_RS29685	0.42	-0.1
6,597,934	+		PFLU_RS29685	0.42	+0.1
6,597,935	-		PFLU_RS29685	0.42	+0.3
6,597,940	+		PFLU_RS29685	0.42	+0.8
6,597,940	+		PFLU_RS29685	0.42	+0.2
6,597,940	+		PFLU_RS29685	0.42	+0.3
6,597,940	+		PFLU_RS29685	0.42	+0.2
6,597,940	+		PFLU_RS29685	0.42	-0.4
6,597,940	+		PFLU_RS29685	0.42	-1.4
6,597,940	+		PFLU_RS29685	0.42	-0.3
6,597,941	-		PFLU_RS29685	0.43	-1.0
6,597,941	-		PFLU_RS29685	0.43	-1.6
6,597,941	-		PFLU_RS29685	0.43	-0.6
6,597,941	-		PFLU_RS29685	0.43	-0.4
6,597,941	-		PFLU_RS29685	0.43	+0.6
6,598,053	+		PFLU_RS29685	0.45	+1.1
6,598,053	+		PFLU_RS29685	0.45	-1.1
6,598,054	-		PFLU_RS29685	0.45	+0.1
6,598,054	-		PFLU_RS29685	0.45	+0.3
6,598,054	-		PFLU_RS29685	0.45	-0.3
6,598,054	-		PFLU_RS29685	0.45	-0.7
6,598,054	-		PFLU_RS29685	0.45	+0.8
6,598,054	-		PFLU_RS29685	0.45	+0.4
6,598,054	-		PFLU_RS29685	0.45	-0.3
6,598,114	+		PFLU_RS29685	0.46	-1.5
6,598,114	+		PFLU_RS29685	0.46	-1.1
6,598,114	+		PFLU_RS29685	0.46	+0.1
6,598,115	-		PFLU_RS29685	0.46	+1.6
6,598,115	-		PFLU_RS29685	0.46	-0.6
6,598,115	-		PFLU_RS29685	0.46	+0.3
6,598,115	-		PFLU_RS29685	0.46	-1.4
6,598,115	-		PFLU_RS29685	0.46	-0.6
6,598,132	+		PFLU_RS29685	0.47	+0.7
6,598,176	+		PFLU_RS29685	0.48	+0.5
6,598,176	+		PFLU_RS29685	0.48	-0.5
6,598,190	+		PFLU_RS29685	0.48	-0.0
6,598,190	+		PFLU_RS29685	0.48	-0.7
6,598,191	-		PFLU_RS29685	0.48	-1.8
6,598,191	-		PFLU_RS29685	0.48	+0.9
6,598,258	+		PFLU_RS29685	0.50	+0.3
6,598,273	+		PFLU_RS29685	0.50	+0.2
6,598,273	+		PFLU_RS29685	0.50	+0.3
6,598,273	+		PFLU_RS29685	0.50	+0.6
6,598,273	+		PFLU_RS29685	0.50	-0.5
6,598,274	-		PFLU_RS29685	0.50	+0.1
6,598,274	-		PFLU_RS29685	0.50	-1.6
6,598,274	-		PFLU_RS29685	0.50	-0.4
6,598,274	-		PFLU_RS29685	0.50	-0.9
6,598,317	+		PFLU_RS29685	0.51	+0.2
6,598,318	-		PFLU_RS29685	0.51	+0.5
6,598,321	+		PFLU_RS29685	0.51	-1.4
6,598,321	+		PFLU_RS29685	0.51	-0.2
6,598,322	-		PFLU_RS29685	0.51	+1.3
6,598,411	+		PFLU_RS29685	0.53	+0.1
6,598,412	-		PFLU_RS29685	0.53	+0.6
6,598,441	+		PFLU_RS29685	0.54	-2.1
6,598,441	+		PFLU_RS29685	0.54	-0.6
6,598,442	-		PFLU_RS29685	0.54	+0.0
6,598,519	+		PFLU_RS29685	0.56	+0.4
6,598,519	+		PFLU_RS29685	0.56	+0.6
6,598,520	-		PFLU_RS29685	0.56	+0.9
6,598,520	-		PFLU_RS29685	0.56	+0.1
6,598,520	-		PFLU_RS29685	0.56	+1.2
6,598,520	-		PFLU_RS29685	0.56	+0.4
6,598,630	+		PFLU_RS29685	0.58	-0.4
6,598,630	+		PFLU_RS29685	0.58	-0.3
6,598,630	+		PFLU_RS29685	0.58	+0.4
6,598,631	-		PFLU_RS29685	0.58	+0.9
6,598,631	-		PFLU_RS29685	0.58	-1.1
6,598,631	-		PFLU_RS29685	0.58	-2.2
6,598,636	+		PFLU_RS29685	0.58	+1.8
6,598,636	+		PFLU_RS29685	0.58	-0.2
6,598,636	+		PFLU_RS29685	0.58	+0.6
6,598,636	+		PFLU_RS29685	0.58	-1.7
6,598,636	+		PFLU_RS29685	0.58	+0.1
6,598,637	-		PFLU_RS29685	0.58	-0.2
6,598,637	-		PFLU_RS29685	0.58	+0.6
6,598,637	-		PFLU_RS29685	0.58	-1.1
6,598,668	+		PFLU_RS29685	0.59	-0.6
6,598,668	+		PFLU_RS29685	0.59	-0.1
6,598,668	+		PFLU_RS29685	0.59	-1.6
6,598,668	+		PFLU_RS29685	0.59	+0.7
6,598,668	+		PFLU_RS29685	0.59	-1.2
6,598,669	-		PFLU_RS29685	0.59	-0.3
6,598,669	-		PFLU_RS29685	0.59	+0.1
6,598,669	-		PFLU_RS29685	0.59	-0.1
6,598,669	-		PFLU_RS29685	0.59	-0.4
6,598,801	+		PFLU_RS29685	0.62	+1.4
6,598,802	-		PFLU_RS29685	0.62	+0.6
6,598,802	-		PFLU_RS29685	0.62	-0.1
6,598,807	+		PFLU_RS29685	0.62	+0.4
6,598,807	+		PFLU_RS29685	0.62	+0.1
6,598,807	+		PFLU_RS29685	0.62	+1.8
6,598,807	+		PFLU_RS29685	0.62	+0.5
6,598,808	-		PFLU_RS29685	0.62	+0.1
6,598,808	-		PFLU_RS29685	0.62	+1.4
6,598,882	+		PFLU_RS29685	0.64	-0.3
6,598,883	-		PFLU_RS29685	0.64	-1.7
6,598,942	+		PFLU_RS29685	0.65	-0.3
6,598,943	-		PFLU_RS29685	0.65	+0.7
6,599,005	+		PFLU_RS29685	0.67	-0.5
6,599,006	-		PFLU_RS29685	0.67	+0.2
6,599,006	-		PFLU_RS29685	0.67	-0.4
6,599,006	-		PFLU_RS29685	0.67	-0.5
6,599,129	-		PFLU_RS29685	0.70	-1.6
6,599,218	+		PFLU_RS29685	0.72	-0.5
6,599,218	+		PFLU_RS29685	0.72	+1.0
6,599,218	+		PFLU_RS29685	0.72	-0.3
6,599,219	-		PFLU_RS29685	0.72	-0.1
6,599,290	+		PFLU_RS29685	0.73	-0.1
6,599,290	+		PFLU_RS29685	0.73	+0.0
6,599,291	-		PFLU_RS29685	0.73	-0.1
6,599,415	+		PFLU_RS29685	0.76	+0.4
6,599,415	+		PFLU_RS29685	0.76	-0.9
6,599,416	-		PFLU_RS29685	0.76	+0.6
6,599,431	+		PFLU_RS29685	0.77	-2.2
6,599,432	-		PFLU_RS29685	0.77	-0.5
6,599,516	-		PFLU_RS29685	0.79	+0.0
6,599,516	-		PFLU_RS29685	0.79	-0.1
6,599,578	+		PFLU_RS29685	0.80	-0.4
6,599,578	+		PFLU_RS29685	0.80	+1.0
6,599,578	+		PFLU_RS29685	0.80	-2.7
6,599,579	-		PFLU_RS29685	0.80	+0.1
6,599,579	-		PFLU_RS29685	0.80	+0.9
6,599,579	-		PFLU_RS29685	0.80	-0.4
6,599,579	-		PFLU_RS29685	0.80	+0.2
6,599,579	-		PFLU_RS29685	0.80	+0.3
6,599,579	-		PFLU_RS29685	0.80	+0.1
6,599,579	-		PFLU_RS29685	0.80	-0.1
6,599,685	+		PFLU_RS29685	0.82	-1.4
6,599,686	-		PFLU_RS29685	0.82	-0.9
6,599,686	-		PFLU_RS29685	0.82	-0.7
6,599,686	-		PFLU_RS29685	0.82	+0.3
6,599,707	+		PFLU_RS29685	0.83	+0.4
6,599,707	+		PFLU_RS29685	0.83	+0.4
6,599,707	+		PFLU_RS29685	0.83	+0.5
6,599,707	+		PFLU_RS29685	0.83	-0.6
6,599,707	+		PFLU_RS29685	0.83	+0.1
6,599,707	+		PFLU_RS29685	0.83	-0.1
6,599,707	+		PFLU_RS29685	0.83	+0.1
6,599,708	-		PFLU_RS29685	0.83	-0.9
6,599,708	-		PFLU_RS29685	0.83	+0.7
6,599,708	-		PFLU_RS29685	0.83	+0.3
6,599,713	+		PFLU_RS29685	0.83	-0.0
6,599,728	+		PFLU_RS29685	0.83	+0.1
6,599,782	+		PFLU_RS29685	0.85	+0.2
6,599,783	-		PFLU_RS29685	0.85	-0.3
6,599,783	-		PFLU_RS29685	0.85	+0.7
6,599,896	+		PFLU_RS29685	0.87	+0.8
6,599,897	-		PFLU_RS29685	0.87	-0.2
6,599,897	-		PFLU_RS29685	0.87	+0.3
6,599,897	-		PFLU_RS29685	0.87	+0.1
6,599,897	-		PFLU_RS29685	0.87	-0.2
6,599,899	+		PFLU_RS29685	0.87	+0.3
6,599,899	+		PFLU_RS29685	0.87	+1.1
6,599,899	+		PFLU_RS29685	0.87	+0.3
6,599,899	+		PFLU_RS29685	0.87	-0.2
6,599,899	+		PFLU_RS29685	0.87	+0.4
6,599,899	+		PFLU_RS29685	0.87	+0.7
6,599,899	+		PFLU_RS29685	0.87	+0.9
6,599,899	+		PFLU_RS29685	0.87	+0.4
6,599,899	+		PFLU_RS29685	0.87	+0.9
6,599,900	-		PFLU_RS29685	0.87	+0.2
6,599,900	-		PFLU_RS29685	0.87	-1.0
6,599,900	-		PFLU_RS29685	0.87	-0.8
6,599,935	+		PFLU_RS29685	0.88	-0.8
6,599,935	+		PFLU_RS29685	0.88	+1.7
6,599,936	-		PFLU_RS29685	0.88	+0.1
6,599,936	-		PFLU_RS29685	0.88	+1.2
6,599,936	-		PFLU_RS29685	0.88	+0.8
6,599,968	-		PFLU_RS29685	0.89	+0.3
6,599,980	+		PFLU_RS29685	0.89	+0.2
6,599,980	+		PFLU_RS29685	0.89	-0.1
6,599,981	-		PFLU_RS29685	0.89	-0.0
6,600,003	+		PFLU_RS29685	0.90	+0.0
6,600,003	+		PFLU_RS29685	0.90	-0.2
6,600,004	-		PFLU_RS29685	0.90	+1.5
6,600,006	+		PFLU_RS29685	0.90	+0.4
6,600,006	+		PFLU_RS29685	0.90	+0.4
6,600,007	-		PFLU_RS29685	0.90	-0.4
6,600,047	-				-0.3
6,600,052	+				-1.6
6,600,052	+				-1.5
6,600,053	-				-1.9
6,600,053	-				+0.6
6,600,132	+				-1.5
6,600,151	+				+0.6
6,600,151	+				+1.3
6,600,151	+				-0.3
6,600,151	+				-0.3
6,600,152	-				+0.8
6,600,182	+				-0.1
6,600,182	+				+0.8
6,600,182	+				-0.7
6,600,182	+				+0.3
6,600,182	+				-0.8
6,600,182	+				+0.3
6,600,182	+				-1.0
6,600,183	-				+0.8
6,600,183	-				+1.1
6,600,183	-				+1.7
6,600,183	-				+1.3
6,600,183	-				+0.7
6,600,183	-				-0.2
6,600,183	-				-1.0
6,600,183	-				+0.9
6,600,183	-				+0.6
6,600,183	-				-1.6
6,600,183	-				-0.4
6,600,183	-				+1.1
6,600,183	-				+0.8
6,600,184	+				-2.0
6,600,184	+				+0.5
6,600,184	+				+1.3
6,600,184	+				-0.1
6,600,184	+				-0.3
6,600,184	+				-0.6
6,600,184	+				+0.3
6,600,184	+				-0.4
6,600,184	+				-1.8
6,600,184	+				+1.5
6,600,184	+				+0.7
6,600,184	+				-0.6
6,600,184	+				+0.4
6,600,184	+				-0.7
6,600,185	-				+0.4
6,600,185	-				-0.4
6,600,185	-				-1.1
6,600,185	-				+0.3
6,600,185	-				+0.3
6,600,185	-				+0.0
6,600,185	-				-2.4
6,600,185	-				-0.2
6,600,190	+				+0.1
6,600,190	+				-0.5
6,600,190	+				+0.8
6,600,251	+				-0.3
6,600,251	+				+0.3
6,600,251	+				-0.1
6,600,251	+				+0.4
6,600,252	-				-0.8
6,600,252	-				+0.4
6,600,252	-				-0.2
6,600,252	-				-0.5
6,600,279	+				-0.7
6,600,279	+				-0.5
6,600,279	+				-0.7
6,600,280	-				+0.3
6,600,283	+				+0.2
6,600,283	+				+0.6
6,600,283	+				+0.4
6,600,283	+				+0.0
6,600,284	-				+0.6
6,600,297	-				+0.5
6,600,321	+				-0.2
6,600,336	-				+0.7
6,600,336	-				-1.2
6,600,358	+				-0.4
6,600,451	+				+0.5
6,600,460	+				+0.6
6,600,460	+				+1.0
6,600,460	+				-1.6
6,600,460	+				+0.9
6,600,461	-				+0.3
6,600,461	-				-1.6
6,600,461	-				+0.1
6,600,461	-				-0.5
6,600,461	-				-0.6
6,600,461	-				+0.2
6,600,461	-				+1.0
6,600,471	+				-2.3
6,601,277	+				-1.0
6,601,277	+				-1.2
6,601,278	-				-0.7
6,601,278	-				+0.4
6,601,278	-				-0.2
6,601,278	-				+0.2
6,601,278	-				+2.9
6,601,313	+				+0.6
6,601,366	+				-0.1
6,601,367	-				-0.9
6,601,367	-				-0.9
6,601,367	-				-0.1
6,601,367	-				-2.0
6,601,367	-				-0.3
6,601,367	-				-0.2
6,601,425	+				+0.9
6,601,425	+				-1.7
6,601,426	-				+0.4