Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS24035

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
5,384,312	+		PFLU_RS24030	0.47	-0.1
5,384,312	+		PFLU_RS24030	0.47	+0.1
5,384,313	-		PFLU_RS24030	0.47	-0.1
5,384,313	-		PFLU_RS24030	0.47	+0.4
5,384,313	-		PFLU_RS24030	0.47	+0.5
5,384,313	-		PFLU_RS24030	0.47	+0.1
5,384,313	-		PFLU_RS24030	0.47	+1.0
5,384,385	+		PFLU_RS24030	0.53	+2.2
5,384,504	+		PFLU_RS24030	0.62	+1.3
5,384,504	+		PFLU_RS24030	0.62	+1.1
5,384,504	+		PFLU_RS24030	0.62	+0.0
5,384,504	+		PFLU_RS24030	0.62	-0.2
5,384,504	+		PFLU_RS24030	0.62	+0.9
5,384,504	+		PFLU_RS24030	0.62	+0.8
5,384,504	+		PFLU_RS24030	0.62	-1.6
5,384,504	+		PFLU_RS24030	0.62	-0.2
5,384,505	-		PFLU_RS24030	0.62	+1.0
5,384,505	-		PFLU_RS24030	0.62	+0.1
5,384,505	-		PFLU_RS24030	0.62	-0.3
5,384,505	-		PFLU_RS24030	0.62	-0.3
5,384,505	-		PFLU_RS24030	0.62	+0.9
5,384,505	-		PFLU_RS24030	0.62	-1.8
5,384,505	-		PFLU_RS24030	0.62	+0.7
5,384,505	-		PFLU_RS24030	0.62	+0.4
5,384,547	+		PFLU_RS24030	0.66	+0.9
5,384,547	+		PFLU_RS24030	0.66	+0.7
5,384,547	+		PFLU_RS24030	0.66	+0.9
5,384,548	-		PFLU_RS24030	0.66	+0.4
5,384,548	-		PFLU_RS24030	0.66	+0.9
5,384,582	+		PFLU_RS24030	0.68	+2.1
5,384,583	-		PFLU_RS24030	0.68	+0.4
5,384,583	-		PFLU_RS24030	0.68	+0.8
5,384,609	+		PFLU_RS24030	0.70	+0.3
5,384,609	+		PFLU_RS24030	0.70	-0.6
5,384,609	+		PFLU_RS24030	0.70	+0.1
5,384,609	+		PFLU_RS24030	0.70	+0.2
5,384,610	-		PFLU_RS24030	0.71	-0.1
5,384,610	-		PFLU_RS24030	0.71	+0.5
5,384,610	-		PFLU_RS24030	0.71	+0.3
5,384,610	-		PFLU_RS24030	0.71	+0.5
5,384,768	+		PFLU_RS24030	0.83	+1.1
5,384,769	-		PFLU_RS24030	0.83	-0.8
5,384,769	-		PFLU_RS24030	0.83	+1.3
5,384,769	-		PFLU_RS24030	0.83	+0.5
5,384,769	-		PFLU_RS24030	0.83	+0.1
5,384,769	-		PFLU_RS24030	0.83	+0.7
5,384,836	-		PFLU_RS24030	0.88	-0.1
5,384,836	-		PFLU_RS24030	0.88	+1.7
5,384,905	+				+0.6
5,384,906	-				-0.9
5,384,970	+				-0.6
5,384,989	+				-0.5
5,384,990	-				-0.2
5,384,990	-				+0.2
5,384,990	-				-0.3
5,384,992	+				-2.4
5,384,992	+				+0.7
5,384,992	+				-0.2
5,384,992	+				+0.6
5,384,992	+				-0.8
5,384,992	+				+0.6
5,384,993	-				+1.0
5,384,993	-				+0.9
5,384,993	-				-0.4
5,384,993	-				-0.9
5,384,993	-				-0.1
5,384,993	-				+0.9
5,385,026	+				-0.6
5,385,026	+				+0.4
5,385,026	+				+0.7
5,385,026	+				+1.7
5,385,026	+				-0.1
5,385,027	-				+0.5
5,385,027	-				+1.1
5,385,027	-				+0.2
5,385,049	+				+0.2
5,385,136	+				+0.3
5,385,137	-				+0.4
5,385,137	-				+1.0
5,385,137	-				+0.1
5,385,190	-				-1.0
5,385,331	-		PFLU_RS24035	0.34	-0.8
5,385,331	-		PFLU_RS24035	0.34	-0.3
5,385,440	+				-0.7
5,385,551	-		PFLU_RS24040	0.16	+0.7
5,385,571	+		PFLU_RS24040	0.19	+0.2
5,385,660	+		PFLU_RS24040	0.32	-0.8
5,385,660	+		PFLU_RS24040	0.32	-0.2
5,385,661	-		PFLU_RS24040	0.32	+1.0
5,385,739	+		PFLU_RS24040	0.44	+0.4
5,385,767	+		PFLU_RS24040	0.48	-2.3
5,385,767	+		PFLU_RS24040	0.48	+0.7
5,385,767	+		PFLU_RS24040	0.48	+0.4
5,385,768	-		PFLU_RS24040	0.48	-1.2
5,385,768	-		PFLU_RS24040	0.48	+0.6
5,385,838	+		PFLU_RS24040	0.58	+0.6
5,385,838	+		PFLU_RS24040	0.58	+1.3
5,385,838	+		PFLU_RS24040	0.58	+0.7
5,385,838	+		PFLU_RS24040	0.58	+1.5
5,385,838	+		PFLU_RS24040	0.58	-1.1
5,385,838	+		PFLU_RS24040	0.58	-0.3
5,385,838	+		PFLU_RS24040	0.58	-0.3
5,385,838	+		PFLU_RS24040	0.58	+0.8
5,385,838	+		PFLU_RS24040	0.58	-1.2
5,385,838	+		PFLU_RS24040	0.58	-0.0
5,385,838	+		PFLU_RS24040	0.58	+0.6
5,385,838	+		PFLU_RS24040	0.58	+0.4
5,385,838	+		PFLU_RS24040	0.58	-1.6
5,385,838	+		PFLU_RS24040	0.58	+0.8
5,385,838	+		PFLU_RS24040	0.58	-0.8
5,385,839	-		PFLU_RS24040	0.59	+0.2
5,385,839	-		PFLU_RS24040	0.59	+0.2
5,385,839	-		PFLU_RS24040	0.59	+0.1
5,385,839	-		PFLU_RS24040	0.59	-0.2
5,385,839	-		PFLU_RS24040	0.59	-0.3
5,385,839	-		PFLU_RS24040	0.59	+0.2
5,385,839	-		PFLU_RS24040	0.59	-0.0
5,385,839	-		PFLU_RS24040	0.59	-2.5
5,385,839	-		PFLU_RS24040	0.59	-0.6
5,385,839	-		PFLU_RS24040	0.59	-0.3
5,385,839	-		PFLU_RS24040	0.59	-1.4
5,385,839	-		PFLU_RS24040	0.59	+1.8
5,385,849	+		PFLU_RS24040	0.60	-2.6
5,385,850	-		PFLU_RS24040	0.60	+0.9
5,385,850	-		PFLU_RS24040	0.60	+0.3
5,386,027	+		PFLU_RS24040	0.86	-1.0
5,386,027	+		PFLU_RS24040	0.86	+1.3
5,386,027	+		PFLU_RS24040	0.86	-0.6
5,386,027	+		PFLU_RS24040	0.86	+1.0
5,386,028	-		PFLU_RS24040	0.87	-0.1
5,386,028	-		PFLU_RS24040	0.87	+1.0
5,386,037	-		PFLU_RS24040	0.88	+1.0
5,386,098	+				+0.3
5,386,099	-				+1.0
5,386,133	+				-0.6
5,386,133	+				-1.2
5,386,133	+				-0.3
5,386,133	+				+1.0
5,386,134	-				-0.1
5,386,163	+				+0.4
5,386,163	+				+1.1
5,386,163	+				+0.5
5,386,163	+				+0.2
5,386,164	-				-0.7
5,386,164	-				-1.0
5,386,164	-				+0.2
5,386,164	-				+0.5
5,386,164	-				+1.7
5,386,167	+				-0.0
5,386,167	+				-1.6
5,386,167	+				+0.5
5,386,167	+				-0.3
5,386,167	+				-0.9
5,386,167	+				-0.3
5,386,167	+				-0.9
5,386,167	+				+0.6
5,386,167	+				+0.3
5,386,167	+				+0.7
5,386,167	+				-1.9
5,386,167	+				+1.3
5,386,167	+				-0.3
5,386,167	+				-0.5
5,386,168	-				-0.2
5,386,168	-				-1.2
5,386,168	-				+0.2
5,386,168	-				-0.2
5,386,168	-				+0.5
5,386,168	-				+0.6
5,386,168	-				-0.6
5,386,168	-				+0.3
5,386,168	-				-0.5
5,386,168	-				-1.2
5,386,168	-				-1.8
5,386,168	-				+1.4
5,386,168	-				+0.7
5,386,168	-				+0.4
5,386,168	-				-1.1
5,386,168	-				+1.6
5,386,195	+				+0.3
5,386,196	-				-0.7
5,386,322	+		PFLU_RS24045	0.29	-0.4
5,386,322	+		PFLU_RS24045	0.29	+0.0
5,386,322	+		PFLU_RS24045	0.29	+0.8
5,386,323	-		PFLU_RS24045	0.29	-0.7