Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS18295

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
4,151,012	+		PFLU_RS18290	0.72	-1.5
4,151,012	+		PFLU_RS18290	0.72	-0.2
4,151,012	+		PFLU_RS18290	0.72	-1.2
4,151,012	+		PFLU_RS18290	0.72	-0.4
4,151,012	+		PFLU_RS18290	0.72	-1.1
4,151,013	-		PFLU_RS18290	0.72	+0.1
4,151,013	-		PFLU_RS18290	0.72	+0.3
4,151,013	-		PFLU_RS18290	0.72	+0.3
4,151,013	-		PFLU_RS18290	0.72	-1.7
4,151,013	-		PFLU_RS18290	0.72	-1.4
4,151,013	-		PFLU_RS18290	0.72	+1.3
4,151,013	-		PFLU_RS18290	0.72	-1.0
4,151,013	-		PFLU_RS18290	0.72	+0.9
4,151,013	-		PFLU_RS18290	0.72	-0.9
4,151,013	-		PFLU_RS18290	0.72	-1.4
4,151,013	-		PFLU_RS18290	0.72	+1.3
4,151,013	-		PFLU_RS18290	0.72	+1.2
4,151,015	+		PFLU_RS18290	0.72	+0.8
4,151,015	+		PFLU_RS18290	0.72	+0.9
4,151,016	-		PFLU_RS18290	0.72	-0.7
4,151,016	-		PFLU_RS18290	0.72	+0.1
4,151,016	-		PFLU_RS18290	0.72	-1.1
4,151,061	+		PFLU_RS18290	0.74	-0.7
4,151,061	+		PFLU_RS18290	0.74	-0.3
4,151,061	+		PFLU_RS18290	0.74	+0.8
4,151,061	+		PFLU_RS18290	0.74	+0.9
4,151,061	+		PFLU_RS18290	0.74	+0.7
4,151,061	+		PFLU_RS18290	0.74	+0.6
4,151,061	+		PFLU_RS18290	0.74	+0.5
4,151,061	+		PFLU_RS18290	0.74	+1.6
4,151,062	-		PFLU_RS18290	0.74	+0.3
4,151,062	-		PFLU_RS18290	0.74	-0.5
4,151,062	-		PFLU_RS18290	0.74	+0.5
4,151,062	-		PFLU_RS18290	0.74	+0.4
4,151,062	-		PFLU_RS18290	0.74	-0.2
4,151,062	-		PFLU_RS18290	0.74	+0.5
4,151,062	-		PFLU_RS18290	0.74	+0.1
4,151,062	-		PFLU_RS18290	0.74	+0.0
4,151,062	-		PFLU_RS18290	0.74	-1.9
4,151,062	-		PFLU_RS18290	0.74	-0.5
4,151,062	-		PFLU_RS18290	0.74	-1.4
4,151,062	-		PFLU_RS18290	0.74	-0.5
4,151,062	-		PFLU_RS18290	0.74	-2.3
4,151,062	-		PFLU_RS18290	0.74	+0.9
4,151,062	-		PFLU_RS18290	0.74	+1.0
4,151,062	-		PFLU_RS18290	0.74	-0.2
4,151,062	-		PFLU_RS18290	0.74	+1.1
4,151,062	-		PFLU_RS18290	0.74	-0.6
4,151,062	-		PFLU_RS18290	0.74	-0.2
4,151,062	-		PFLU_RS18290	0.74	+1.3
4,151,063	+		PFLU_RS18290	0.74	-0.2
4,151,063	+		PFLU_RS18290	0.74	+0.3
4,151,063	+		PFLU_RS18290	0.74	+0.5
4,151,063	+		PFLU_RS18290	0.74	-0.3
4,151,063	+		PFLU_RS18290	0.74	+0.4
4,151,063	+		PFLU_RS18290	0.74	+0.5
4,151,064	-		PFLU_RS18290	0.74	+0.0
4,151,064	-		PFLU_RS18290	0.74	-0.1
4,151,064	-		PFLU_RS18290	0.74	+0.3
4,151,064	-		PFLU_RS18290	0.74	+1.4
4,151,085	-		PFLU_RS18290	0.75	+0.2
4,151,089	+		PFLU_RS18290	0.76	-1.2
4,151,089	+		PFLU_RS18290	0.76	-0.5
4,151,089	+		PFLU_RS18290	0.76	-0.8
4,151,089	+		PFLU_RS18290	0.76	+0.7
4,151,089	+		PFLU_RS18290	0.76	+0.5
4,151,089	+		PFLU_RS18290	0.76	-0.9
4,151,089	+		PFLU_RS18290	0.76	-1.8
4,151,089	+		PFLU_RS18290	0.76	-0.4
4,151,089	+		PFLU_RS18290	0.76	+1.4
4,151,090	-		PFLU_RS18290	0.76	+0.3
4,151,090	-		PFLU_RS18290	0.76	-0.1
4,151,129	+		PFLU_RS18290	0.78	-0.3
4,151,129	+		PFLU_RS18290	0.78	+2.0
4,151,129	+		PFLU_RS18290	0.78	+0.6
4,151,129	+		PFLU_RS18290	0.78	+1.5
4,151,129	+		PFLU_RS18290	0.78	-0.5
4,151,129	+		PFLU_RS18290	0.78	+0.6
4,151,129	+		PFLU_RS18290	0.78	+0.0
4,151,129	+		PFLU_RS18290	0.78	+0.0
4,151,129	+		PFLU_RS18290	0.78	-0.3
4,151,129	+		PFLU_RS18290	0.78	+1.1
4,151,129	+		PFLU_RS18290	0.78	+1.0
4,151,130	-		PFLU_RS18290	0.78	+0.2
4,151,130	-		PFLU_RS18290	0.78	-0.3
4,151,130	-		PFLU_RS18290	0.78	+0.5
4,151,130	-		PFLU_RS18290	0.78	+1.0
4,151,130	-		PFLU_RS18290	0.78	+0.5
4,151,130	-		PFLU_RS18290	0.78	-1.1
4,151,130	-		PFLU_RS18290	0.78	+0.2
4,151,130	-		PFLU_RS18290	0.78	+0.4
4,151,130	-		PFLU_RS18290	0.78	+0.1
4,151,130	-		PFLU_RS18290	0.78	+1.1
4,151,130	-		PFLU_RS18290	0.78	+0.9
4,151,130	-		PFLU_RS18290	0.78	+0.9
4,151,130	-		PFLU_RS18290	0.78	+1.5
4,151,130	-		PFLU_RS18290	0.78	-0.7
4,151,130	-		PFLU_RS18290	0.78	+0.6
4,151,130	-		PFLU_RS18290	0.78	+0.1
4,151,276	+		PFLU_RS18290	0.84	-0.0
4,151,277	-		PFLU_RS18290	0.85	+1.3
4,151,366	+		PFLU_RS18290	0.89	-0.5
4,151,366	+		PFLU_RS18290	0.89	-0.6
4,151,367	-		PFLU_RS18290	0.89	+0.9
4,151,367	-		PFLU_RS18290	0.89	+0.4
4,151,367	-		PFLU_RS18290	0.89	-1.5
4,151,381	+		PFLU_RS18290	0.89	-1.3
4,151,381	+		PFLU_RS18290	0.89	+0.0
4,151,381	+		PFLU_RS18290	0.89	+1.3
4,151,381	+		PFLU_RS18290	0.89	+0.4
4,151,382	-		PFLU_RS18290	0.89	-0.7
4,151,382	-		PFLU_RS18290	0.89	+1.1
4,151,382	-		PFLU_RS18290	0.89	+1.1
4,151,441	+				+0.2
4,151,441	+				+1.0
4,151,441	+				-0.5
4,151,441	+				-2.0
4,151,441	+				+1.2
4,151,441	+				+0.3
4,151,441	+				-0.1
4,151,441	+				-0.1
4,151,441	+				+0.3
4,151,441	+				-0.9
4,151,441	+				+0.1
4,151,441	+				+1.7
4,151,441	+				+0.4
4,151,441	+				+0.4
4,151,441	+				-0.9
4,151,442	-				-0.4
4,151,442	-				-1.4
4,151,442	-				-0.3
4,151,442	-				-0.4
4,151,442	-				-1.5
4,151,442	-				-0.0
4,151,442	-				-0.3
4,151,442	-				-0.9
4,151,442	-				-1.5
4,151,442	-				-0.0
4,151,442	-				-0.4
4,151,442	-				+0.1
4,151,442	-				-0.8
4,151,442	-				-0.8
4,151,672	+				+0.6
4,151,672	+				-0.5
4,151,672	+				-0.5
4,151,673	-				+0.3
4,151,716	+				+1.0
4,151,716	+				+1.3
4,151,740	+				+0.8
4,151,759	-				-1.1
4,151,770	+				-0.3
4,151,784	+				-0.2
4,151,784	+				-0.1
4,151,784	+				+2.5
4,151,784	+				-0.6
4,151,784	+				+0.4
4,151,785	-				-0.6
4,151,785	-				-0.8
4,151,811	+				+0.5
4,151,811	+				+0.4
4,151,811	+				-1.3
4,151,811	+				-0.6
4,151,812	-				-0.0
4,151,812	-				+0.3
4,151,916	+				-0.5
4,151,917	-				+0.7
4,151,917	-				-0.1
4,151,985	+				-0.6
4,151,986	-				-0.1
4,152,301	+		PFLU_RS18295	0.49	+0.8
4,152,301	+		PFLU_RS18295	0.49	+0.4
4,152,301	+		PFLU_RS18295	0.49	-0.1
4,152,301	+		PFLU_RS18295	0.49	+0.5
4,152,302	-		PFLU_RS18295	0.49	-0.5
4,152,302	-		PFLU_RS18295	0.49	-0.2
4,152,302	-		PFLU_RS18295	0.49	+0.5
4,152,302	-		PFLU_RS18295	0.49	+0.2
4,152,380	+		PFLU_RS18295	0.62	-0.9
4,152,380	+		PFLU_RS18295	0.62	+0.9
4,152,381	-		PFLU_RS18295	0.62	+0.3
4,152,497	+		PFLU_RS18295	0.80	-1.4
4,152,498	-		PFLU_RS18295	0.81	+0.7
4,152,531	-		PFLU_RS18295	0.86	-0.6
4,152,666	+				+0.7
4,152,666	+				+1.1
4,152,666	+				+1.9
4,152,667	-				-0.7
4,152,838	+		PFLU_RS30890	0.33	+0.9
4,152,838	+		PFLU_RS30890	0.33	-0.1
4,152,838	+		PFLU_RS30890	0.33	+0.7
4,152,838	+		PFLU_RS30890	0.33	+0.8
4,152,838	+		PFLU_RS30890	0.33	+1.1
4,152,838	+		PFLU_RS30890	0.33	+0.6
4,152,839	-		PFLU_RS30890	0.33	+0.1
4,152,839	-		PFLU_RS30890	0.33	+0.8
4,152,839	-		PFLU_RS30890	0.33	+1.3
4,152,839	-		PFLU_RS30890	0.33	+0.6
4,152,839	-		PFLU_RS30890	0.33	-0.4
4,152,839	-		PFLU_RS30890	0.33	+0.1
4,152,839	-		PFLU_RS30890	0.33	-0.4
4,152,839	-		PFLU_RS30890	0.33	+1.0
4,152,839	-		PFLU_RS30890	0.33	-1.9
4,153,240	+				-0.3
4,153,306	+				+0.4
4,153,306	+				-0.9
4,153,306	+				+0.4
4,153,307	-				+0.5
4,153,307	-				+0.9
4,153,338	-				-0.6
4,153,344	+				-0.1
4,153,345	-				-2.4
4,153,355	+				+0.6
4,153,355	+				+1.7
4,153,358	+				+0.9
4,153,358	+				+0.4
4,153,358	+				+0.9
4,153,358	+				-0.3
4,153,358	+				-1.5
4,153,358	+				+0.2
4,153,358	+				+1.0
4,153,358	+				-0.7
4,153,358	+				+0.4
4,153,358	+				+0.5
4,153,358	+				+0.4
4,153,358	+				-1.2
4,153,358	+				+0.4
4,153,359	-				-0.7
4,153,359	-				-0.0
4,153,359	-				+1.2
4,153,359	-				+3.0
4,153,359	-				+0.2
4,153,359	-				-0.5
4,153,359	-				+0.4
4,153,359	-				+0.5
4,153,359	-				+0.0
4,153,359	-				-3.8
4,153,362	+				+1.1
4,153,362	+				+0.6
4,153,362	+				-0.8
4,153,362	+				+0.4
4,153,362	+				+0.8
4,153,362	+				+2.0
4,153,362	+				-0.1
4,153,362	+				+0.3
4,153,362	+				+2.0
4,153,362	+				+0.1
4,153,362	+				+0.1
4,153,362	+				+1.1
4,153,362	+				+0.5
4,153,363	-				-0.4
4,153,363	-				+0.6
4,153,363	-				-0.5
4,153,363	-				-1.0
4,153,363	-				+1.3
4,153,363	-				+0.5
4,153,363	-				-0.2
4,153,425	+				-0.0
4,153,425	+				+1.7
4,153,425	+				+0.8
4,153,426	-				-1.2
4,153,426	-				+1.0
4,153,426	-				-0.5
4,153,426	-				+1.1
4,153,426	-				-1.8
4,153,426	-				+0.6
4,153,426	-				+0.5
4,153,431	-				-0.4
4,153,438	+				+0.4
4,153,439	-				-0.5
4,153,448	-				-1.1
4,153,448	-				-0.0
4,153,461	+				-0.0
4,153,461	+				-0.1
4,153,462	-				+1.1
4,153,462	-				+0.0
4,153,462	-				-0.7
4,153,462	-				-0.4
4,153,462	-				+0.4
4,153,530	+		PFLU_RS18305	0.26	+0.4
4,153,530	+		PFLU_RS18305	0.26	+0.6
4,153,530	+		PFLU_RS18305	0.26	+1.0
4,153,530	+		PFLU_RS18305	0.26	+0.1
4,153,531	-		PFLU_RS18305	0.26	+0.7
4,153,531	-		PFLU_RS18305	0.26	+0.4
4,153,531	-		PFLU_RS18305	0.26	+0.2
4,153,531	-		PFLU_RS18305	0.26	-0.9
4,153,531	-		PFLU_RS18305	0.26	-2.1
4,153,619	+		PFLU_RS18305	0.59	-3.2
4,153,619	+		PFLU_RS18305	0.59	+0.1
4,153,619	+		PFLU_RS18305	0.59	-1.0