Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS11065

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
2,441,905	+				+0.8
2,441,905	+				+0.2
2,441,905	+				+0.6
2,441,905	+				+0.0
2,441,906	-				-0.1
2,441,906	-				-0.0
2,441,941	+				+0.4
2,441,941	+				-2.1
2,441,942	-				-0.5
2,441,942	-				-2.1
2,441,942	-				+0.3
2,441,942	-				-1.8
2,441,942	-				+0.1
2,441,972	+				+0.4
2,441,972	+				+0.1
2,441,973	-				+0.7
2,442,030	+				-0.6
2,442,030	+				+0.3
2,442,031	-				+1.4
2,442,031	-				-0.3
2,442,053	+				-0.1
2,442,053	+				-2.0
2,442,053	+				-0.3
2,442,054	-				+0.9
2,442,054	-				+0.9
2,442,054	-				+2.2
2,442,054	-				-0.6
2,442,072	+				-0.3
2,442,072	+				+0.0
2,442,073	-				+1.9
2,442,073	-				-1.8
2,442,073	-				+0.8
2,442,094	+				+0.6
2,442,095	-				-0.0
2,442,095	-				+0.0
2,442,095	-				-1.1
2,442,095	-				+0.8
2,442,109	+				+0.5
2,442,109	+				-0.2
2,442,110	-				-1.1
2,442,110	-				+0.1
2,442,164	-				-0.9
2,442,164	-				-0.7
2,442,164	-				+0.2
2,442,164	-				-0.9
2,442,277	-				+0.0
2,442,287	+				+0.3
2,442,288	-				-0.5
2,442,288	-				+0.7
2,442,298	+				+0.9
2,442,299	-				-1.2
2,442,299	-				+0.4
2,442,299	-				+0.5
2,442,322	-				-1.0
2,442,338	+				-0.7
2,442,338	+				-0.7
2,442,338	+				-1.9
2,442,339	-				-0.7
2,442,339	-				+0.6
2,442,380	+				-0.4
2,442,380	+				-0.4
2,442,381	-				-0.7
2,442,386	+				-0.7
2,442,386	+				-1.0
2,442,387	-				+0.8
2,442,393	+				+1.9
2,442,393	+				-1.5
2,442,393	+				+1.0
2,442,393	+				-0.7
2,442,393	+				-0.0
2,442,394	-				+0.9
2,442,437	+				+0.1
2,442,437	+				+2.3
2,442,438	-				-1.2
2,442,543	+		PFLU_RS11060	0.21	+0.8
2,442,543	+		PFLU_RS11060	0.21	-0.1
2,442,543	+		PFLU_RS11060	0.21	-2.1
2,442,544	-		PFLU_RS11060	0.21	-2.5
2,442,544	-		PFLU_RS11060	0.21	-0.2
2,442,544	-		PFLU_RS11060	0.21	-0.0
2,442,688	-		PFLU_RS11060	0.53	+0.6
2,442,688	-		PFLU_RS11060	0.53	+1.2
2,442,727	+		PFLU_RS11060	0.62	+0.3
2,442,727	+		PFLU_RS11060	0.62	+0.7
2,442,727	+		PFLU_RS11060	0.62	+1.0
2,442,728	-		PFLU_RS11060	0.62	-0.8
2,442,728	-		PFLU_RS11060	0.62	-1.3
2,442,728	-		PFLU_RS11060	0.62	+0.7
2,442,797	+		PFLU_RS11060	0.78	-3.0
2,442,828	-		PFLU_RS11060	0.85	+0.7
2,442,840	-		PFLU_RS11060	0.88	-0.7
2,442,882	+				+0.9
2,442,883	-				+0.3
2,442,883	-				+1.1
2,442,890	+				+0.3
2,442,890	+				+0.0
2,442,891	-				+0.5
2,442,891	-				-1.0
2,442,898	+				-0.0
2,442,898	+				-0.1
2,442,898	+				-0.7
2,442,898	+				+0.2
2,442,898	+				+0.2
2,442,898	+				-1.2
2,442,899	-				-0.8
2,442,899	-				-0.7
2,442,899	-				+0.7
2,442,899	-				-1.8
2,442,899	-				+0.8
2,442,899	-				+1.3
2,442,905	+				+0.9
2,442,905	+				+1.1
2,442,906	-				-0.8
2,442,906	-				+1.0
2,442,906	-				-0.4
2,442,944	+				+0.1
2,443,041	-		PFLU_RS11065	0.24	-0.1
2,443,131	+		PFLU_RS11065	0.39	+0.7
2,443,131	+		PFLU_RS11065	0.39	-0.1
2,443,132	-		PFLU_RS11065	0.40	+1.6
2,443,132	-		PFLU_RS11065	0.40	-1.0
2,443,241	+		PFLU_RS11065	0.58	-0.8
2,443,241	+		PFLU_RS11065	0.58	+0.3
2,443,241	+		PFLU_RS11065	0.58	-1.1
2,443,241	+		PFLU_RS11065	0.58	-0.2
2,443,241	+		PFLU_RS11065	0.58	+0.8
2,443,241	+		PFLU_RS11065	0.58	-2.8
2,443,241	+		PFLU_RS11065	0.58	+0.1
2,443,241	+		PFLU_RS11065	0.58	-0.1
2,443,241	+		PFLU_RS11065	0.58	-0.2
2,443,241	+		PFLU_RS11065	0.58	+0.1
2,443,241	+		PFLU_RS11065	0.58	+0.9
2,443,241	+		PFLU_RS11065	0.58	+0.9
2,443,242	-		PFLU_RS11065	0.58	-0.5
2,443,242	-		PFLU_RS11065	0.58	+0.8
2,443,242	-		PFLU_RS11065	0.58	+0.0
2,443,242	-		PFLU_RS11065	0.58	+0.8
2,443,242	-		PFLU_RS11065	0.58	-0.1
2,443,242	-		PFLU_RS11065	0.58	-1.5
2,443,242	-		PFLU_RS11065	0.58	+0.5
2,443,242	-		PFLU_RS11065	0.58	+1.4
2,443,242	-		PFLU_RS11065	0.58	+0.5
2,443,242	-		PFLU_RS11065	0.58	+0.7
2,443,242	-		PFLU_RS11065	0.58	-0.2
2,443,242	-		PFLU_RS11065	0.58	+1.3
2,443,296	+		PFLU_RS11065	0.68	+0.2
2,443,466	+				+0.0
2,443,466	+				-1.3
2,443,466	+				-0.1
2,443,467	-				-1.1
2,443,467	-				-0.4
2,443,467	-				-0.8
2,443,467	-				+0.3
2,443,475	+				-0.1
2,443,484	+				-0.2
2,443,484	+				-0.6
2,443,484	+				+1.0
2,443,485	-				-1.2
2,443,485	-				+0.3
2,443,488	+				+0.0
2,443,488	+				+0.6
2,443,488	+				+1.3
2,443,488	+				-0.3
2,443,488	+				+0.6
2,443,489	-				-0.0
2,443,489	-				-1.4
2,443,489	-				+0.2
2,443,489	-				+0.9
2,443,489	-				-0.5
2,443,517	+				+1.0
2,443,518	-				-1.9
2,443,536	+				-0.6
2,443,536	+				-0.5
2,443,537	-				-1.6
2,443,537	-				+0.9
2,443,538	+				+1.0
2,443,538	+				-0.7
2,443,538	+				-0.3
2,443,539	-				-1.7
2,443,539	-				-2.8
2,443,539	-				+0.3
2,443,539	-				-0.3
2,443,539	-				+0.9
2,443,539	-				-0.4
2,443,539	-				-2.8
2,443,539	-				-2.3
2,443,550	-				+0.6
2,443,550	-				+1.9
2,443,550	-				-0.3
2,443,570	+				-0.3
2,443,572	+				+1.8
2,443,572	+				-1.8
2,443,573	-				+0.3
2,443,573	-				-1.9
2,443,618	-				+0.9
2,443,653	+				-0.3
2,443,654	-				-0.8
2,443,672	+				+0.6
2,443,672	+				-1.1
2,443,672	+				-0.1
2,443,672	+				+0.5
2,443,673	-				+1.0
2,443,673	-				+0.4
2,443,673	-				-0.4
2,443,673	-				-0.6
2,443,707	+				+1.5
2,443,769	-				-0.7
2,443,871	+				+2.1
2,443,871	+				+0.9
2,443,871	+				+1.6
2,443,871	+				+0.6
2,443,871	+				-2.0
2,443,871	+				+0.2
2,443,871	+				+1.1
2,443,872	-				-1.5
2,443,872	-				+0.0
2,443,872	-				+1.1
2,443,872	-				-0.8
2,443,872	-				+0.2
2,443,872	-				-1.1
2,443,872	-				+1.5
2,443,913	+				-0.6
2,443,913	+				-0.3
2,443,913	+				+0.4
2,443,914	-				+0.2
2,443,914	-				+0.4
2,443,914	-				+1.3
2,443,914	-				+1.1
2,444,020	+		PFLU_RS11070	0.22	-0.1
2,444,020	+		PFLU_RS11070	0.22	-0.7
2,444,021	-		PFLU_RS11070	0.22	+0.5
2,444,021	-		PFLU_RS11070	0.22	+0.6
2,444,021	-		PFLU_RS11070	0.22	+0.1
2,444,021	-		PFLU_RS11070	0.22	-0.3
2,444,076	+		PFLU_RS11070	0.31	+0.2
2,444,076	+		PFLU_RS11070	0.31	+1.4
2,444,076	+		PFLU_RS11070	0.31	+0.2
2,444,076	+		PFLU_RS11070	0.31	-0.2
2,444,076	+		PFLU_RS11070	0.31	+0.5
2,444,076	+		PFLU_RS11070	0.31	+0.3
2,444,076	+		PFLU_RS11070	0.31	-0.5
2,444,076	+		PFLU_RS11070	0.31	+0.1
2,444,076	+		PFLU_RS11070	0.31	+0.8
2,444,076	-		PFLU_RS11070	0.31	-0.7
2,444,077	-		PFLU_RS11070	0.31	+0.5
2,444,077	-		PFLU_RS11070	0.31	-0.3
2,444,077	-		PFLU_RS11070	0.31	-0.9
2,444,091	-		PFLU_RS11070	0.34	+0.6
2,444,327	+		PFLU_RS11070	0.74	+0.8
2,444,327	+		PFLU_RS11070	0.74	+0.3
2,444,327	+		PFLU_RS11070	0.74	+1.5
2,444,327	+		PFLU_RS11070	0.74	+0.5
2,444,328	-		PFLU_RS11070	0.74	-0.2
2,444,328	-		PFLU_RS11070	0.74	+0.5
2,444,328	-		PFLU_RS11070	0.74	+0.0
2,444,328	-		PFLU_RS11070	0.74	+0.7
2,444,328	-		PFLU_RS11070	0.74	-0.1
2,444,328	-		PFLU_RS11070	0.74	+1.0
2,444,476	-				+0.9
2,444,481	+				-1.1
2,444,481	+				+1.3
2,444,481	+				+0.4
2,444,481	+				+0.9
2,444,481	+				+0.7
2,444,481	+				-0.6
2,444,482	-				+0.6
2,444,482	-				-0.1
2,444,482	-				+1.4
2,444,482	-				+1.3