Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS07930

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
1,767,827	+		PFLU_RS07925	0.64	+0.8
1,767,828	-		PFLU_RS07925	0.64	-0.4
1,767,828	-		PFLU_RS07925	0.64	+0.1
1,767,828	-		PFLU_RS07925	0.64	+0.0
1,767,871	-		PFLU_RS07925	0.66	+0.1
1,768,035	-		PFLU_RS07925	0.72	-1.4
1,768,196	+		PFLU_RS07925	0.79	-1.0
1,768,196	+		PFLU_RS07925	0.79	+0.4
1,768,196	+		PFLU_RS07925	0.79	-0.4
1,768,196	+		PFLU_RS07925	0.79	-0.4
1,768,197	-		PFLU_RS07925	0.79	-0.2
1,768,197	-		PFLU_RS07925	0.79	+0.2
1,768,197	-		PFLU_RS07925	0.79	+0.7
1,768,197	-		PFLU_RS07925	0.79	-0.2
1,768,197	-		PFLU_RS07925	0.79	+0.1
1,768,197	-		PFLU_RS07925	0.79	-0.7
1,768,197	-		PFLU_RS07925	0.79	-0.0
1,768,314	-		PFLU_RS07925	0.83	+0.4
1,768,319	+		PFLU_RS07925	0.84	-0.4
1,768,319	+		PFLU_RS07925	0.84	-0.7
1,768,319	+		PFLU_RS07925	0.84	-2.3
1,768,319	+		PFLU_RS07925	0.84	-1.0
1,768,319	+		PFLU_RS07925	0.84	-2.0
1,768,320	-		PFLU_RS07925	0.84	+1.0
1,768,320	-		PFLU_RS07925	0.84	+0.8
1,768,785	+				-1.3
1,768,824	+				+0.0
1,768,836	+				-0.7
1,768,836	+				+1.2
1,768,837	-				-0.0
1,768,837	-				+0.6
1,768,904	+		PFLU_RS07930	0.17	+0.7
1,768,904	+		PFLU_RS07930	0.17	+0.8
1,768,904	+		PFLU_RS07930	0.17	+0.3
1,768,904	+		PFLU_RS07930	0.17	-1.9
1,768,904	+		PFLU_RS07930	0.17	-1.9
1,768,904	+		PFLU_RS07930	0.17	+0.1
1,768,904	+		PFLU_RS07930	0.17	+0.8
1,768,904	+		PFLU_RS07930	0.17	+0.2
1,768,905	-		PFLU_RS07930	0.17	+0.2
1,768,905	-		PFLU_RS07930	0.17	+1.8
1,768,905	-		PFLU_RS07930	0.17	-1.5
1,768,905	-		PFLU_RS07930	0.17	-0.7
1,768,958	+		PFLU_RS07930	0.25	+0.7
1,768,958	+		PFLU_RS07930	0.25	+0.8
1,768,958	+		PFLU_RS07930	0.25	+0.3
1,768,958	+		PFLU_RS07930	0.25	-0.7
1,768,958	+		PFLU_RS07930	0.25	+0.3
1,768,959	-		PFLU_RS07930	0.25	+0.3
1,768,959	-		PFLU_RS07930	0.25	-0.2
1,768,959	-		PFLU_RS07930	0.25	-2.1
1,768,959	-		PFLU_RS07930	0.25	+0.7
1,768,959	-		PFLU_RS07930	0.25	-0.9
1,768,959	-		PFLU_RS07930	0.25	+0.4
1,768,979	-		PFLU_RS07930	0.28	+0.7
1,769,064	+		PFLU_RS07930	0.40	-0.6
1,769,064	+		PFLU_RS07930	0.40	+1.3
1,769,065	-		PFLU_RS07930	0.40	-0.1
1,769,065	-		PFLU_RS07930	0.40	+1.2
1,769,065	-		PFLU_RS07930	0.40	-1.2
1,769,326	-		PFLU_RS07930	0.78	+0.5
1,769,326	-		PFLU_RS07930	0.78	+0.9
1,769,385	+		PFLU_RS07930	0.86	-2.4
1,769,385	+		PFLU_RS07930	0.86	+1.2
1,769,385	+		PFLU_RS07930	0.86	+0.3
1,769,385	+		PFLU_RS07930	0.86	-1.2
1,769,385	+		PFLU_RS07930	0.86	+0.2
1,769,385	+		PFLU_RS07930	0.86	-1.7
1,769,385	+		PFLU_RS07930	0.86	-0.3
1,769,386	-		PFLU_RS07930	0.86	-0.5
1,769,386	-		PFLU_RS07930	0.86	-0.0
1,769,386	-		PFLU_RS07930	0.86	+0.4
1,769,386	-		PFLU_RS07930	0.86	+0.4
1,769,386	-		PFLU_RS07930	0.86	-0.4
1,769,386	-		PFLU_RS07930	0.86	+0.1
1,769,386	-		PFLU_RS07930	0.86	+0.0
1,769,386	-		PFLU_RS07930	0.86	-0.9
1,769,386	-		PFLU_RS07930	0.86	-0.5
1,769,386	-		PFLU_RS07930	0.86	-3.0
1,769,434	+				+0.7
1,769,435	-				-1.2
1,769,550	+				+0.9
1,769,550	+				-0.7
1,769,550	+				+0.5
1,769,550	+				+1.0
1,769,550	+				+0.2
1,769,550	+				-1.4
1,769,550	+				-1.1
1,769,550	+				+1.1
1,769,551	-				-1.4
1,769,551	-				+0.2
1,769,551	-				-1.0
1,769,551	-				-1.0
1,769,551	-				-0.0
1,769,551	-				+0.0
1,769,551	-				-2.8
1,769,551	-				-1.1
1,769,554	+				+1.9
1,769,554	+				-0.7
1,769,555	-				+0.5
1,769,555	-				-1.0
1,769,555	-				-0.7
1,769,555	-				+0.4
1,769,555	-				+0.4
1,769,555	-				+0.6
1,769,555	-				+1.3
1,769,555	-				-1.3
1,769,555	-				-2.2
1,769,556	+				-0.7
1,769,556	+				+0.1
1,769,556	+				+1.3
1,769,556	+				-0.1
1,769,556	+				-0.7
1,769,556	+				-1.8
1,769,556	+				-0.4
1,769,556	+				-0.4
1,769,557	-				-0.7
1,769,557	-				-0.6
1,769,557	-				-0.6
1,769,557	-				+0.5
1,769,557	-				-1.5
1,769,557	-				-0.6
1,769,557	-				+0.3
1,769,557	-				-0.1
1,769,557	-				+0.1
1,769,560	+				-1.3
1,769,561	-				+0.9
1,769,561	-				+0.1
1,769,664	+		PFLU_RS07935	0.20	-1.4
1,769,664	+		PFLU_RS07935	0.20	+0.1
1,769,664	+		PFLU_RS07935	0.20	-0.7
1,769,664	+		PFLU_RS07935	0.20	+1.4
1,769,664	+		PFLU_RS07935	0.20	+0.9
1,769,664	+		PFLU_RS07935	0.20	+1.0
1,769,665	-		PFLU_RS07935	0.20	-0.2
1,770,136	-				+1.1
1,770,136	-				-0.0
1,770,136	-				-0.7
1,770,136	-				+1.1
1,770,237	+				+0.2
1,770,238	-				-1.4
1,770,265	+				-0.4
1,770,265	+				+0.4
1,770,265	+				+0.8
1,770,265	+				+0.3
1,770,266	-				+0.6
1,770,284	+				-0.3
1,770,320	+				-1.0
1,770,320	+				-1.5
1,770,320	+				-0.9
1,770,320	+				+0.2
1,770,321	-				+0.9
1,770,321	-				+1.5
1,770,324	+				-1.0
1,770,324	+				+0.4
1,770,324	+				+0.3
1,770,324	+				-0.7
1,770,324	+				-2.4
1,770,324	+				-0.4
1,770,324	+				+0.7
1,770,324	+				-1.5
1,770,324	+				+0.2
1,770,324	+				+0.5
1,770,324	+				+0.8
1,770,324	+				-1.2
1,770,324	+				-1.0
1,770,324	+				+0.2
1,770,324	+				-1.3
1,770,324	+				-0.4
1,770,324	+				-1.3
1,770,324	+				+0.6
1,770,324	+				+1.1
1,770,324	+				+0.9
1,770,324	+				+0.8
1,770,324	+				-0.3
1,770,324	+				+0.9
1,770,324	+				+0.9
1,770,324	+				-1.1
1,770,324	+				-1.0
1,770,324	+				+0.4
1,770,324	+				-0.6
1,770,325	-				+0.7
1,770,325	-				+0.3
1,770,325	-				-1.1
1,770,325	-				-2.0
1,770,325	-				+0.6
1,770,325	-				-1.0
1,770,325	-				-0.4
1,770,325	-				-0.2
1,770,325	-				+0.5
1,770,325	-				-0.7
1,770,325	-				-1.5
1,770,325	-				-1.9
1,770,325	-				-0.3
1,770,325	-				-0.3
1,770,325	-				-0.7
1,770,325	-				+1.6
1,770,325	-				-0.5
1,770,325	-				+0.0
1,770,325	-				+0.2
1,770,325	-				-0.7
1,770,325	-				-2.0
1,770,325	-				+0.0
1,770,325	-				-0.9
1,770,325	-				-0.5
1,770,325	-				+0.3
1,770,325	-				-0.0
1,770,332	+				-0.2
1,770,332	+				+0.6
1,770,332	+				+0.6
1,770,332	+				+0.5
1,770,332	+				-0.4
1,770,333	-				-0.0
1,770,333	-				-0.2
1,770,333	-				+1.8
1,770,333	-				-1.6
1,770,333	-				+0.3
1,770,334	+				-1.7
1,770,334	+				+0.1
1,770,334	+				-0.9
1,770,334	+				-0.4
1,770,334	+				-0.8
1,770,334	+				-0.4
1,770,334	+				+1.3
1,770,334	+				+0.4
1,770,334	+				-0.6
1,770,334	+				-0.4
1,770,334	+				+0.0
1,770,334	+				-0.5
1,770,334	+				+0.4
1,770,334	+				-0.1
1,770,335	-				+0.2
1,770,335	-				+0.8
1,770,335	-				+1.1
1,770,335	-				+2.3
1,770,335	-				+0.4
1,770,335	-				+0.3
1,770,335	-				+0.2
1,770,335	-				-0.4
1,770,335	-				-1.1
1,770,363	+				-0.5
1,770,363	+				+0.2
1,770,376	+				-0.8
1,770,376	+				+0.4
1,770,383	-				-0.5
1,770,383	-				+0.5
1,770,383	-				-0.5
1,770,383	-				+0.2
1,770,406	+				+0.9
1,770,406	+				+1.1
1,770,406	+				+1.5
1,770,407	-				+0.1
1,770,421	+				+0.3
1,770,421	+				+0.0
1,770,421	+				-0.2
1,770,421	+				-0.2
1,770,421	+				+0.4
1,770,422	-				-0.4
1,770,422	-				+0.1
1,770,422	-				+1.1