Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS07255

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
1,617,617	+		PFLU_RS07250	0.42	+0.1
1,617,617	+		PFLU_RS07250	0.42	-1.5
1,617,650	+		PFLU_RS07250	0.44	+0.2
1,618,085	+		PFLU_RS07250	0.75	+0.1
1,618,085	+		PFLU_RS07250	0.75	+0.9
1,618,085	+		PFLU_RS07250	0.75	+0.3
1,618,086	-		PFLU_RS07250	0.75	-1.6
1,618,086	-		PFLU_RS07250	0.75	-2.9
1,618,232	+		PFLU_RS07250	0.85	+0.9
1,618,232	+		PFLU_RS07250	0.85	+0.5
1,618,233	-		PFLU_RS07250	0.85	+1.8
1,618,233	-		PFLU_RS07250	0.85	+1.0
1,618,233	-		PFLU_RS07250	0.85	-0.6
1,618,250	+		PFLU_RS07250	0.86	-1.2
1,618,250	+		PFLU_RS07250	0.86	-0.5
1,618,250	+		PFLU_RS07250	0.86	+0.6
1,618,250	+		PFLU_RS07250	0.86	+2.3
1,618,250	+		PFLU_RS07250	0.86	-0.9
1,618,250	+		PFLU_RS07250	0.86	-0.8
1,618,251	-		PFLU_RS07250	0.86	-0.2
1,618,251	-		PFLU_RS07250	0.86	+0.7
1,618,251	-		PFLU_RS07250	0.86	-0.4
1,618,251	-		PFLU_RS07250	0.86	-2.2
1,618,251	-		PFLU_RS07250	0.86	-0.1
1,618,299	-		PFLU_RS07250	0.90	-0.2
1,618,299	-		PFLU_RS07250	0.90	+0.2
1,618,299	-		PFLU_RS07250	0.90	+0.5
1,618,325	+				-2.6
1,618,325	+				+0.1
1,618,326	-				+0.2
1,618,376	-				-0.0
1,618,376	-				+0.9
1,618,376	-				-0.6
1,618,429	-				-0.9
1,618,472	+				+0.7
1,618,472	+				+0.4
1,618,472	+				+0.5
1,618,472	+				+0.2
1,618,472	+				-1.0
1,618,472	+				+0.7
1,618,472	+				+1.0
1,618,473	-				+0.1
1,618,473	-				-0.1
1,618,473	-				-0.0
1,618,473	-				+1.5
1,618,473	-				-0.5
1,618,473	-				-1.9
1,618,473	-				+0.7
1,618,478	-				+0.8
1,618,504	+				-0.9
1,618,505	-				+1.5
1,618,505	-				-0.4
1,618,505	-				-1.0
1,618,505	-				+0.3
1,618,509	+				+1.0
1,618,509	+				-2.1
1,618,509	+				+0.7
1,618,509	+				+0.4
1,618,509	+				+0.1
1,618,509	+				-0.0
1,618,509	+				+0.2
1,618,509	+				-0.5
1,618,509	+				+0.6
1,618,510	-				+1.2
1,618,510	-				+0.3
1,618,510	-				+0.9
1,618,510	-				-0.3
1,618,510	-				-0.2
1,618,510	-				+0.4
1,618,510	-				+0.0
1,618,535	+				+0.3
1,618,555	+				-0.3
1,618,556	-				-0.5
1,618,556	-				-0.6
1,618,556	-				+1.6
1,618,655	+		PFLU_RS07255	0.47	+0.5
1,618,655	+		PFLU_RS07255	0.47	-0.6
1,618,655	+		PFLU_RS07255	0.47	-1.4
1,618,655	+		PFLU_RS07255	0.47	-1.8
1,618,656	-		PFLU_RS07255	0.47	+0.5
1,618,656	-		PFLU_RS07255	0.47	-0.6
1,618,656	-		PFLU_RS07255	0.47	+0.9
1,618,656	-		PFLU_RS07255	0.47	+1.2
1,618,656	-		PFLU_RS07255	0.47	-1.3
1,618,755	+		PFLU_RS07255	0.89	-0.2
1,618,756	-		PFLU_RS07255	0.89	-0.1
1,618,827	-				+0.4
1,618,846	+				-1.1
1,618,846	+				-0.8
1,618,847	-				+1.2
1,618,960	+		PFLU_RS07260	0.14	+0.6
1,618,960	+		PFLU_RS07260	0.14	-1.5
1,618,961	-		PFLU_RS07260	0.14	+0.2
1,619,064	+		PFLU_RS07260	0.23	+0.0
1,619,064	+		PFLU_RS07260	0.23	+0.0
1,619,075	+		PFLU_RS07260	0.24	-0.3
1,619,087	+		PFLU_RS07260	0.26	+0.5
1,619,305	+		PFLU_RS07260	0.46	+0.0
1,619,306	-		PFLU_RS07260	0.46	+1.0
1,619,306	-		PFLU_RS07260	0.46	-0.3
1,619,380	+		PFLU_RS07260	0.53	+0.4
1,619,380	+		PFLU_RS07260	0.53	+1.3
1,619,380	+		PFLU_RS07260	0.53	+0.9
1,619,380	+		PFLU_RS07260	0.53	-0.0
1,619,380	+		PFLU_RS07260	0.53	+1.2
1,619,381	-		PFLU_RS07260	0.53	-0.1
1,619,446	+		PFLU_RS07260	0.59	-1.1
1,619,446	+		PFLU_RS07260	0.59	+0.5
1,619,446	+		PFLU_RS07260	0.59	-0.1
1,619,446	+		PFLU_RS07260	0.59	+0.0
1,619,446	+		PFLU_RS07260	0.59	+0.7
1,619,446	+		PFLU_RS07260	0.59	+1.1
1,619,446	+		PFLU_RS07260	0.59	+0.0
1,619,446	+		PFLU_RS07260	0.59	-0.3
1,619,446	+		PFLU_RS07260	0.59	+0.4
1,619,446	+		PFLU_RS07260	0.59	-0.8
1,619,446	+		PFLU_RS07260	0.59	-1.6
1,619,447	-		PFLU_RS07260	0.59	+0.2
1,619,447	-		PFLU_RS07260	0.59	-0.1
1,619,447	-		PFLU_RS07260	0.59	-0.6
1,619,447	-		PFLU_RS07260	0.59	+0.6
1,619,447	-		PFLU_RS07260	0.59	-0.1
1,619,447	-		PFLU_RS07260	0.59	-1.4
1,619,447	-		PFLU_RS07260	0.59	+1.2
1,619,447	-		PFLU_RS07260	0.59	+0.8
1,619,447	-		PFLU_RS07260	0.59	+0.9
1,619,447	-		PFLU_RS07260	0.59	+0.3
1,619,447	-		PFLU_RS07260	0.59	+0.1
1,619,447	-		PFLU_RS07260	0.59	+0.5
1,619,447	-		PFLU_RS07260	0.59	+1.7
1,619,447	-		PFLU_RS07260	0.59	-0.7
1,619,447	-		PFLU_RS07260	0.59	+0.7
1,619,447	-		PFLU_RS07260	0.59	+0.2
1,619,447	-		PFLU_RS07260	0.59	-2.1
1,619,447	-		PFLU_RS07260	0.59	+1.6
1,619,447	-		PFLU_RS07260	0.59	-2.0
1,619,447	-		PFLU_RS07260	0.59	-0.7
1,619,494	+		PFLU_RS07260	0.64	+0.7
1,619,494	+		PFLU_RS07260	0.64	+0.5
1,619,494	+		PFLU_RS07260	0.64	+0.2
1,619,494	+		PFLU_RS07260	0.64	+0.1
1,619,494	+		PFLU_RS07260	0.64	-1.0
1,619,494	+		PFLU_RS07260	0.64	-0.8
1,619,494	+		PFLU_RS07260	0.64	-0.6
1,619,494	+		PFLU_RS07260	0.64	+0.8
1,619,494	+		PFLU_RS07260	0.64	+0.7
1,619,494	+		PFLU_RS07260	0.64	+0.5
1,619,494	+		PFLU_RS07260	0.64	+0.5
1,619,495	-		PFLU_RS07260	0.64	+1.7
1,619,495	-		PFLU_RS07260	0.64	+1.0
1,619,495	-		PFLU_RS07260	0.64	-0.6
1,619,495	-		PFLU_RS07260	0.64	+0.4
1,619,495	-		PFLU_RS07260	0.64	+2.0
1,619,495	-		PFLU_RS07260	0.64	+1.0
1,619,495	-		PFLU_RS07260	0.64	-0.4
1,619,495	-		PFLU_RS07260	0.64	+0.1
1,619,524	+		PFLU_RS07260	0.66	+1.3
1,619,524	+		PFLU_RS07260	0.66	+0.1
1,619,524	+		PFLU_RS07260	0.66	+1.5
1,619,524	+		PFLU_RS07260	0.66	+0.0
1,619,524	+		PFLU_RS07260	0.66	-1.9
1,619,525	-		PFLU_RS07260	0.66	-1.1
1,619,525	-		PFLU_RS07260	0.66	+0.2
1,619,525	-		PFLU_RS07260	0.66	-0.1
1,619,525	-		PFLU_RS07260	0.66	-0.4
1,619,525	-		PFLU_RS07260	0.66	-0.1
1,619,525	-		PFLU_RS07260	0.66	+0.9
1,619,525	-		PFLU_RS07260	0.66	+0.9
1,619,567	+		PFLU_RS07260	0.70	+0.5
1,619,572	+		PFLU_RS07260	0.71	+0.4
1,619,572	+		PFLU_RS07260	0.71	-0.1
1,619,572	+		PFLU_RS07260	0.71	+0.7
1,619,573	-		PFLU_RS07260	0.71	+0.1
1,619,573	-		PFLU_RS07260	0.71	+0.3
1,619,650	+		PFLU_RS07260	0.78	-0.7
1,619,651	-		PFLU_RS07260	0.78	+0.1
1,619,651	-		PFLU_RS07260	0.78	-1.2
1,619,651	-		PFLU_RS07260	0.78	+1.4
1,619,651	-		PFLU_RS07260	0.78	-0.1
1,619,651	-		PFLU_RS07260	0.78	+0.5
1,619,664	-		PFLU_RS07260	0.79	-0.4
1,619,665	+		PFLU_RS07260	0.80	+0.3
1,619,665	+		PFLU_RS07260	0.80	+2.6
1,619,665	+		PFLU_RS07260	0.80	+0.0