Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS07125

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
1,587,204	+		PFLU_RS07120	0.66	+0.5
1,587,204	+		PFLU_RS07120	0.66	-1.2
1,587,204	+		PFLU_RS07120	0.66	+0.6
1,587,204	+		PFLU_RS07120	0.66	-0.1
1,587,204	+		PFLU_RS07120	0.66	+0.8
1,587,204	+		PFLU_RS07120	0.66	-0.2
1,587,204	+		PFLU_RS07120	0.66	+1.8
1,587,204	+		PFLU_RS07120	0.66	+0.7
1,587,204	+		PFLU_RS07120	0.66	-0.4
1,587,204	+		PFLU_RS07120	0.66	+0.2
1,587,204	+		PFLU_RS07120	0.66	+0.9
1,587,204	+		PFLU_RS07120	0.66	-0.6
1,587,204	+		PFLU_RS07120	0.66	+0.2
1,587,204	+		PFLU_RS07120	0.66	-0.6
1,587,204	+		PFLU_RS07120	0.66	+0.6
1,587,204	+		PFLU_RS07120	0.66	-1.4
1,587,204	+		PFLU_RS07120	0.66	+1.4
1,587,204	+		PFLU_RS07120	0.66	+0.3
1,587,204	+		PFLU_RS07120	0.66	+0.6
1,587,204	+		PFLU_RS07120	0.66	-1.7
1,587,205	-		PFLU_RS07120	0.66	+0.6
1,587,205	-		PFLU_RS07120	0.66	-1.4
1,587,205	-		PFLU_RS07120	0.66	-0.4
1,587,205	-		PFLU_RS07120	0.66	-0.3
1,587,205	-		PFLU_RS07120	0.66	-1.3
1,587,205	-		PFLU_RS07120	0.66	+0.3
1,587,205	-		PFLU_RS07120	0.66	+0.6
1,587,205	-		PFLU_RS07120	0.66	-1.2
1,587,205	-		PFLU_RS07120	0.66	-0.8
1,587,205	-		PFLU_RS07120	0.66	-2.4
1,587,205	-		PFLU_RS07120	0.66	-0.6
1,587,205	-		PFLU_RS07120	0.66	+0.7
1,587,205	-		PFLU_RS07120	0.66	+0.4
1,587,205	-		PFLU_RS07120	0.66	+0.8
1,587,205	-		PFLU_RS07120	0.66	+0.9
1,587,206	+		PFLU_RS07120	0.66	-0.3
1,587,240	+		PFLU_RS07120	0.68	-0.7
1,587,240	+		PFLU_RS07120	0.68	-2.1
1,587,241	-		PFLU_RS07120	0.68	+0.2
1,587,241	-		PFLU_RS07120	0.68	-0.9
1,587,241	-		PFLU_RS07120	0.68	+0.8
1,587,241	-		PFLU_RS07120	0.68	-0.1
1,587,278	+		PFLU_RS07120	0.69	-0.2
1,587,278	+		PFLU_RS07120	0.69	+0.8
1,587,279	-		PFLU_RS07120	0.70	-0.1
1,587,323	+		PFLU_RS07120	0.72	+0.1
1,587,323	+		PFLU_RS07120	0.72	+0.1
1,587,323	+		PFLU_RS07120	0.72	-0.8
1,587,323	+		PFLU_RS07120	0.72	+0.3
1,587,379	-		PFLU_RS07120	0.74	-0.2
1,587,425	+		PFLU_RS07120	0.77	-0.4
1,587,615	+		PFLU_RS07120	0.86	-0.4
1,587,616	-		PFLU_RS07120	0.86	+1.0
1,587,643	+		PFLU_RS07120	0.88	+0.5
1,587,643	+		PFLU_RS07120	0.88	+0.8
1,587,643	+		PFLU_RS07120	0.88	+0.1
1,587,643	+		PFLU_RS07120	0.88	+0.4
1,587,643	+		PFLU_RS07120	0.88	+0.1
1,587,643	+		PFLU_RS07120	0.88	+0.7
1,587,643	+		PFLU_RS07120	0.88	-1.4
1,587,643	+		PFLU_RS07120	0.88	-0.2
1,587,643	+		PFLU_RS07120	0.88	+0.3
1,587,644	-		PFLU_RS07120	0.88	-0.0
1,587,644	-		PFLU_RS07120	0.88	+0.0
1,587,644	-		PFLU_RS07120	0.88	+1.1
1,587,644	-		PFLU_RS07120	0.88	+1.0
1,587,644	-		PFLU_RS07120	0.88	-1.6
1,587,644	-		PFLU_RS07120	0.88	+0.4
1,587,682	+		PFLU_RS07120	0.89	+0.0
1,587,683	-		PFLU_RS07120	0.90	-0.7
1,587,741	+				+0.6
1,587,741	+				-1.1
1,587,741	+				+0.6
1,587,741	+				+0.9
1,587,741	+				+0.5
1,587,741	+				-0.6
1,587,741	+				-0.7
1,587,741	+				+0.2
1,587,741	+				+0.9
1,587,741	+				+0.7
1,587,741	+				-1.6
1,587,741	+				-0.2
1,587,741	+				-0.7
1,587,741	+				+0.1
1,587,741	+				+0.7
1,587,741	+				-0.4
1,587,742	-				+1.0
1,587,742	-				-0.8
1,587,742	-				+0.3
1,587,742	-				-2.0
1,587,742	-				-0.3
1,587,742	-				+0.8
1,587,742	-				-0.1
1,587,742	-				-0.5
1,587,742	-				+0.8
1,587,742	-				-0.2
1,587,742	-				+0.4
1,587,742	-				-0.7
1,587,742	-				+1.5
1,587,742	-				+0.3
1,587,742	-				+0.6
1,587,769	+				-2.3
1,587,777	+				+0.9
1,587,777	+				-0.7
1,587,777	+				-0.1
1,587,777	+				-0.7
1,587,777	+				+0.3
1,587,778	-				-1.3
1,587,778	-				+0.6
1,587,778	-				-0.3
1,587,778	-				+0.3
1,587,778	-				-0.4
1,587,778	-				+1.1
1,587,778	-				+1.0
1,587,778	-				-0.8
1,587,778	-				-1.0
1,587,778	-				-1.0
1,587,778	-				+1.0
1,587,780	+				-0.1
1,587,780	+				+0.1
1,587,780	+				-0.4
1,587,780	+				+0.4
1,587,781	-				+0.1
1,587,781	-				-1.3
1,587,781	-				+0.6
1,587,781	-				+2.1
1,587,781	-				+0.8
1,587,837	+				-0.4
1,587,837	+				+0.3
1,587,837	+				-0.5
1,587,837	+				+0.6
1,587,838	-				-3.3
1,587,838	-				-0.4
1,587,838	-				-1.5
1,587,838	-				+0.9
1,587,852	-				-0.1
1,587,884	+				+0.0
1,587,884	+				+0.4
1,587,884	+				+0.4
1,587,885	-				-1.2
1,587,885	-				+0.5
1,587,891	+				-0.2
1,587,892	-				+0.5
1,587,939	+				-0.7
1,587,940	-				-0.0
1,588,006	+				-1.2
1,588,006	+				-0.5
1,588,007	-				+0.0
1,588,007	-				+0.9
1,588,027	+				+2.2
1,588,027	+				+0.6
1,588,027	+				+0.8
1,588,027	+				+0.4
1,588,028	-				-1.2
1,588,028	-				+0.6
1,588,028	-				-0.2
1,588,028	-				-0.4
1,588,028	-				+0.6
1,588,028	-				-0.3
1,588,028	-				+0.7
1,588,028	-				+1.1
1,588,028	-				-0.4
1,588,091	+				-0.8
1,588,120	+				-1.3
1,588,120	+				-0.7
1,588,120	+				-0.0
1,588,126	+				-0.3
1,588,126	+				+0.5
1,588,126	+				+0.7
1,588,126	+				-0.2
1,588,126	+				+0.4
1,588,126	+				-0.2
1,588,126	+				-0.6
1,588,126	+				+0.9
1,588,127	-				-0.4
1,588,127	-				-2.1
1,588,127	-				+1.8
1,588,127	-				+1.1
1,588,127	-				-1.4
1,588,127	-				-1.2
1,588,127	-				+0.1
1,588,127	-				-1.3
1,588,127	-				-0.5
1,588,130	+				+0.5
1,588,130	+				-1.0
1,588,130	+				-0.6
1,588,130	+				+0.3
1,588,130	+				-0.3
1,588,130	+				+0.4
1,588,130	+				+0.4
1,588,130	+				+0.1
1,588,130	+				-0.1
1,588,130	+				+1.4
1,588,130	+				+0.5
1,588,130	+				+0.8
1,588,130	+				-0.3
1,588,130	+				-1.5
1,588,130	+				-2.5
1,588,130	+				+0.3
1,588,130	+				+0.2
1,588,130	+				+0.9
1,588,130	+				+1.4
1,588,130	+				+0.6
1,588,130	+				+1.4
1,588,130	+				-0.2
1,588,130	+				+0.1
1,588,130	+				+0.9
1,588,130	+				-0.4
1,588,130	+				+0.5
1,588,130	+				-0.7
1,588,130	+				+0.3
1,588,130	+				+0.3
1,588,130	+				+0.6
1,588,130	+				+2.1
1,588,130	+				-0.2
1,588,130	+				+0.8
1,588,130	+				+0.6
1,588,130	+				-1.9
1,588,130	+				-2.6
1,588,130	+				-1.5
1,588,130	+				+0.1
1,588,130	+				-2.3
1,588,130	+				-0.7
1,588,131	-				-0.5
1,588,131	-				-1.4
1,588,131	-				-1.2
1,588,131	-				-0.1
1,588,131	-				-1.7
1,588,131	-				+0.6
1,588,131	-				-0.4
1,588,131	-				-1.2
1,588,131	-				-0.1
1,588,131	-				-0.6
1,588,131	-				-0.2
1,588,131	-				-0.2
1,588,131	-				-0.3
1,588,131	-				+0.6
1,588,131	-				-0.3
1,588,131	-				-0.2
1,588,131	-				+0.7
1,588,131	-				+0.8
1,588,131	-				-1.2
1,588,131	-				-0.1
1,588,131	-				-0.1
1,588,131	-				+1.0
1,588,131	-				-0.7
1,588,131	-				+0.5
1,588,131	-				-0.4
1,588,131	-				+0.3
1,588,131	-				+0.5
1,588,131	-				+0.8
1,588,131	-				+0.9
1,588,131	-				-0.0
1,588,131	-				-0.2
1,588,131	-				-0.0
1,588,131	-				-0.5
1,588,170	-				+0.1
1,588,170	-				+0.7
1,588,170	-				-0.6
1,588,175	+				-0.6
1,588,175	+				+1.2
1,588,175	+				+0.9
1,588,175	+				+1.3
1,588,175	+				+0.7
1,588,175	+				+0.0
1,588,175	+				+0.2
1,588,175	+				-1.1
1,588,175	+				+1.4
1,588,176	-				-1.9
1,588,176	-				+1.0
1,588,176	-				+0.2
1,588,176	-				+0.4
1,588,176	-				+0.9
1,588,176	-				+0.3
1,588,176	-				+0.2
1,588,176	-				-0.3
1,588,176	-				-0.2
1,588,179	+				-1.4
1,588,179	+				+0.3
1,588,179	+				-0.1
1,588,179	+				+0.8
1,588,179	+				-1.4
1,588,179	+				+0.3
1,588,179	+				+1.0
1,588,179	+				+0.9
1,588,179	+				-0.2
1,588,179	+				+1.2
1,588,179	+				+0.4
1,588,179	+				+0.3
1,588,180	-				+0.3
1,588,180	-				+0.4
1,588,180	-				+1.4
1,588,180	-				+1.1
1,588,180	-				-0.2
1,588,180	-				+0.3
1,588,180	-				-0.4
1,588,180	-				-0.4
1,588,180	-				+0.8
1,588,180	-				+0.4
1,588,180	-				+0.3
1,588,180	-				-2.3
1,588,180	-				-1.2
1,588,180	-				+0.0
1,588,180	-				-0.1
1,588,182	+				-0.2
1,588,182	+				+0.3
1,588,182	+				+1.0
1,588,182	+				+0.4
1,588,183	-				+0.5
1,588,183	-				+0.8
1,588,183	-				-0.8
1,588,183	-				-0.0
1,588,239	+				+3.0
1,588,239	+				-0.3
1,588,239	+				+0.2
1,588,239	+				+0.9
1,588,239	+				+1.6
1,588,240	-				-0.2
1,588,240	-				-0.5
1,588,240	-				+1.8
1,588,240	-				-0.9
1,588,240	-				+0.4
1,588,240	-				+0.4
1,588,240	-				+1.0
1,588,243	+				-0.1
1,588,243	+				-0.3
1,588,243	+				+0.8
1,588,243	+				-0.4
1,588,243	+				+0.8
1,588,243	+				-0.5
1,588,243	+				+0.9
1,588,244	-				+0.9
1,588,244	-				-0.1
1,588,244	-				+1.3
1,588,244	-				-1.0
1,588,244	-				+1.2
1,588,244	-				-0.3
1,588,244	-				-0.8
1,588,244	-				+0.2
1,588,280	+				+0.2
1,588,280	+				+0.7
1,588,281	-				-0.5
1,588,281	-				-0.0
1,588,281	-				-2.0
1,588,281	-				-1.4
1,588,281	-				+1.2
1,588,291	+				+0.7
1,588,351	+				-0.8
1,588,352	-				-0.6
1,588,352	-				-1.2
1,588,365	+				-0.3
1,588,423	+		PFLU_RS07125	0.10	-1.8
1,588,424	-		PFLU_RS07125	0.10	-0.6
1,588,432	-		PFLU_RS07125	0.11	+0.8
1,588,437	+		PFLU_RS07125	0.11	-1.6
1,588,437	+		PFLU_RS07125	0.11	-0.5
1,588,437	+		PFLU_RS07125	0.11	+1.1
1,588,459	+		PFLU_RS07125	0.12	-0.1
1,588,459	+		PFLU_RS07125	0.12	+0.2
1,588,460	-		PFLU_RS07125	0.12	-0.3
1,588,460	-		PFLU_RS07125	0.12	+0.1
1,588,460	-		PFLU_RS07125	0.12	+1.5
1,588,460	-		PFLU_RS07125	0.12	-0.9
1,588,460	-		PFLU_RS07125	0.12	+0.3
1,588,460	-		PFLU_RS07125	0.12	+0.0
1,588,593	+		PFLU_RS07125	0.18	-0.3
1,588,593	+		PFLU_RS07125	0.18	+0.1
1,588,593	+		PFLU_RS07125	0.18	+0.8
1,588,593	+		PFLU_RS07125	0.18	-0.3
1,588,593	+		PFLU_RS07125	0.18	+0.3
1,588,594	-		PFLU_RS07125	0.18	-0.4
1,588,594	-		PFLU_RS07125	0.18	-0.3
1,588,594	-		PFLU_RS07125	0.18	+0.6
1,588,633	+		PFLU_RS07125	0.20	-0.1
1,588,633	+		PFLU_RS07125	0.20	-0.3
1,588,634	-		PFLU_RS07125	0.20	+0.5
1,588,634	-		PFLU_RS07125	0.20	+0.1
1,588,634	-		PFLU_RS07125	0.20	+1.1
1,588,634	-		PFLU_RS07125	0.20	-1.9
1,588,669	+		PFLU_RS07125	0.22	-0.1
1,588,731	-		PFLU_RS07125	0.24	+0.7
1,588,731	-		PFLU_RS07125	0.24	-0.0
1,588,731	-		PFLU_RS07125	0.24	-0.2
1,588,731	-		PFLU_RS07125	0.24	-0.2
1,588,787	-		PFLU_RS07125	0.27	+0.6
1,588,915	-		PFLU_RS07125	0.33	+0.6
1,589,142	+		PFLU_RS07125	0.43	+1.4
1,589,142	+		PFLU_RS07125	0.43	+0.6
1,589,142	+		PFLU_RS07125	0.43	+0.2
1,589,142	+		PFLU_RS07125	0.43	+1.0
1,589,143	-		PFLU_RS07125	0.43	-0.3
1,589,143	-		PFLU_RS07125	0.43	-1.9
1,589,167	+		PFLU_RS07125	0.44	+1.1
1,589,167	+		PFLU_RS07125	0.44	-0.6
1,589,167	+		PFLU_RS07125	0.44	-1.0
1,589,168	-		PFLU_RS07125	0.44	-0.0
1,589,168	-		PFLU_RS07125	0.44	-0.3
1,589,168	-		PFLU_RS07125	0.44	+1.9
1,589,169	+		PFLU_RS07125	0.44	+0.7
1,589,169	+		PFLU_RS07125	0.44	-2.4
1,589,169	+		PFLU_RS07125	0.44	+0.4
1,589,169	+		PFLU_RS07125	0.44	+1.0
1,589,170	-		PFLU_RS07125	0.44	-0.6
1,589,170	-		PFLU_RS07125	0.44	-0.5
1,589,170	-		PFLU_RS07125	0.44	+0.3
1,589,259	-		PFLU_RS07125	0.48	+0.5
1,589,265	+		PFLU_RS07125	0.49	+0.4
1,589,266	-		PFLU_RS07125	0.49	-0.2
1,589,288	+		PFLU_RS07125	0.50	+0.7
1,589,288	+		PFLU_RS07125	0.50	-0.5
1,589,288	+		PFLU_RS07125	0.50	+0.5
1,589,288	+		PFLU_RS07125	0.50	+0.2
1,589,288	+		PFLU_RS07125	0.50	-0.6
1,589,289	-		PFLU_RS07125	0.50	-1.0
1,589,289	-		PFLU_RS07125	0.50	-0.2
1,589,289	-		PFLU_RS07125	0.50	+0.2
1,589,289	-		PFLU_RS07125	0.50	-0.5
1,589,289	-		PFLU_RS07125	0.50	-0.9
1,589,289	-		PFLU_RS07125	0.50	-1.6
1,589,398	-		PFLU_RS07125	0.55	+0.6
1,589,401	+		PFLU_RS07125	0.55	-3.7
1,589,401	+		PFLU_RS07125	0.55	+0.7
1,589,401	+		PFLU_RS07125	0.55	-0.4
1,589,401	+		PFLU_RS07125	0.55	+1.5
1,589,401	+		PFLU_RS07125	0.55	+0.8
1,589,401	+		PFLU_RS07125	0.55	+1.0
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1,589,401	+		PFLU_RS07125	0.55	-2.5
1,589,401	+		PFLU_RS07125	0.55	+0.6
1,589,401	+		PFLU_RS07125	0.55	+2.1
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1,589,616	+		PFLU_RS07125	0.65	-1.4
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1,589,616	+		PFLU_RS07125	0.65	+1.0
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1,590,164	-		PFLU_RS07125	0.90	+0.8
1,590,164	-		PFLU_RS07125	0.90	+0.3
1,590,274	-				+0.4
1,590,376	+				-0.0
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