Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS03780 and PFLU_RS03785 are separated by 79 nucleotides PFLU_RS03785 and PFLU_RS03790 overlap by 2 nucleotides PFLU_RS03790 and PFLU_RS03795 are separated by 360 nucleotides PFLU_RS03795 and PFLU_RS03800 are separated by 253 nucleotides
PFLU_RS03780: PFLU_RS03780 - phosphate acetyltransferase, at 863,711 to 865,810
_RS03780
PFLU_RS03785: PFLU_RS03785 - DUF3565 domain-containing protein, at 865,890 to 866,180
_RS03785
PFLU_RS03790: PFLU_RS03790 - peptidylprolyl isomerase, at 866,179 to 866,664
_RS03790
PFLU_RS03795: PFLU_RS03795 - 30S ribosomal protein S20, at 867,025 to 867,303
_RS03795
PFLU_RS03800: PFLU_RS03800 - murein biosynthesis integral membrane protein MurJ, at 867,557 to 869,095
_RS03800
Position (kb) 866
867 Strain fitness (log2 ratio) -2
-1
0
1 at 865.194 kb on + strand, within PFLU_RS03780 at 865.300 kb on + strand, within PFLU_RS03780 at 865.301 kb on - strand, within PFLU_RS03780 at 865.317 kb on - strand, within PFLU_RS03780 at 865.464 kb on + strand, within PFLU_RS03780 at 865.464 kb on + strand, within PFLU_RS03780 at 865.464 kb on + strand, within PFLU_RS03780 at 865.464 kb on + strand, within PFLU_RS03780 at 865.465 kb on - strand, within PFLU_RS03780 at 865.533 kb on + strand, within PFLU_RS03780 at 865.534 kb on - strand, within PFLU_RS03780 at 865.534 kb on - strand, within PFLU_RS03780 at 865.592 kb on + strand, within PFLU_RS03780 at 865.593 kb on - strand, within PFLU_RS03780 at 865.593 kb on - strand, within PFLU_RS03780 at 865.848 kb on + strand at 865.848 kb on + strand at 865.848 kb on + strand at 865.848 kb on + strand at 865.848 kb on + strand at 865.848 kb on + strand at 865.848 kb on + strand at 865.848 kb on + strand at 865.848 kb on + strand at 865.848 kb on + strand at 865.848 kb on + strand at 865.848 kb on + strand at 865.848 kb on + strand at 865.848 kb on + strand at 865.848 kb on + strand at 865.849 kb on - strand at 865.849 kb on - strand at 865.849 kb on - strand at 865.849 kb on - strand at 865.849 kb on - strand at 865.849 kb on - strand at 865.849 kb on - strand at 865.849 kb on - strand at 865.849 kb on - strand at 865.849 kb on - strand at 865.849 kb on - strand at 865.849 kb on - strand at 865.849 kb on - strand at 865.849 kb on - strand at 865.849 kb on - strand at 865.849 kb on - strand at 865.849 kb on - strand at 865.849 kb on - strand at 865.849 kb on - strand at 865.849 kb on - strand at 865.849 kb on - strand at 865.891 kb on + strand at 865.936 kb on - strand, within PFLU_RS03785 at 866.001 kb on + strand, within PFLU_RS03785 at 866.001 kb on + strand, within PFLU_RS03785 at 866.001 kb on + strand, within PFLU_RS03785 at 866.001 kb on + strand, within PFLU_RS03785 at 866.002 kb on - strand, within PFLU_RS03785 at 866.002 kb on - strand, within PFLU_RS03785 at 866.002 kb on - strand, within PFLU_RS03785 at 866.002 kb on - strand, within PFLU_RS03785 at 866.002 kb on - strand, within PFLU_RS03785 at 866.002 kb on - strand, within PFLU_RS03785 at 866.137 kb on - strand, within PFLU_RS03785 at 866.137 kb on - strand, within PFLU_RS03785 at 866.159 kb on + strand at 866.159 kb on + strand at 866.160 kb on - strand at 866.160 kb on - strand at 866.215 kb on + strand at 866.215 kb on + strand at 866.216 kb on - strand at 866.216 kb on - strand at 866.216 kb on - strand at 866.216 kb on - strand at 866.216 kb on - strand at 866.216 kb on - strand at 866.216 kb on - strand at 866.217 kb on + strand at 866.217 kb on + strand at 866.217 kb on + strand at 866.217 kb on + strand at 866.218 kb on - strand at 866.218 kb on - strand at 866.218 kb on - strand at 866.218 kb on - strand at 866.218 kb on - strand at 866.218 kb on - strand at 866.218 kb on - strand at 866.295 kb on + strand, within PFLU_RS03790 at 866.295 kb on + strand, within PFLU_RS03790 at 866.296 kb on - strand, within PFLU_RS03790 at 866.296 kb on - strand, within PFLU_RS03790 at 866.296 kb on - strand, within PFLU_RS03790 at 866.296 kb on - strand, within PFLU_RS03790 at 866.364 kb on - strand, within PFLU_RS03790 at 866.364 kb on - strand, within PFLU_RS03790 at 866.364 kb on - strand, within PFLU_RS03790 at 866.364 kb on - strand, within PFLU_RS03790 at 866.380 kb on + strand, within PFLU_RS03790 at 866.381 kb on - strand, within PFLU_RS03790 at 866.680 kb on + strand at 866.680 kb on + strand at 866.680 kb on + strand at 866.680 kb on + strand at 866.680 kb on + strand at 866.680 kb on + strand at 866.680 kb on + strand at 866.681 kb on - strand at 866.681 kb on - strand at 866.681 kb on - strand at 866.681 kb on - strand at 866.681 kb on - strand at 866.681 kb on - strand at 866.684 kb on + strand at 866.684 kb on + strand at 866.685 kb on - strand at 866.685 kb on - strand at 866.685 kb on - strand at 866.813 kb on + strand at 866.813 kb on + strand at 866.813 kb on + strand at 866.857 kb on - strand at 866.857 kb on - strand at 866.857 kb on - strand at 866.985 kb on - strand at 867.027 kb on - strand at 867.027 kb on - strand at 867.027 kb on - strand at 867.436 kb on + strand at 867.437 kb on - strand at 867.456 kb on + strand at 867.457 kb on - strand at 867.457 kb on - strand at 867.499 kb on - strand at 867.505 kb on + strand at 867.505 kb on + strand at 867.505 kb on + strand at 867.505 kb on + strand at 867.506 kb on - strand at 867.506 kb on - strand at 867.506 kb on - strand at 867.506 kb on - strand at 867.506 kb on - strand at 867.506 kb on - strand at 867.506 kb on - strand at 867.510 kb on - strand at 867.510 kb on - strand at 867.510 kb on - strand at 867.517 kb on + strand at 867.517 kb on + strand at 867.517 kb on + strand at 867.517 kb on + strand at 867.518 kb on - strand at 867.518 kb on - strand at 867.518 kb on - strand at 867.518 kb on - strand at 867.533 kb on + strand at 867.534 kb on - strand at 867.534 kb on - strand at 867.534 kb on - strand at 867.537 kb on + strand at 867.537 kb on + strand at 867.537 kb on + strand at 867.537 kb on + strand at 867.537 kb on + strand at 867.537 kb on + strand at 867.537 kb on + strand at 867.537 kb on + strand at 867.537 kb on + strand at 867.537 kb on + strand at 867.537 kb on + strand at 867.537 kb on + strand at 867.537 kb on + strand at 867.538 kb on - strand at 867.538 kb on - strand at 867.538 kb on - strand at 867.538 kb on - strand at 867.538 kb on - strand at 867.538 kb on - strand at 867.538 kb on - strand at 867.538 kb on - strand at 867.538 kb on - strand at 867.538 kb on - strand at 867.539 kb on + strand at 867.540 kb on - strand at 867.540 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 865,194 + PFLU_RS03780 0.71 +0.0 865,300 + PFLU_RS03780 0.76 +0.7 865,301 - PFLU_RS03780 0.76 +0.7 865,317 - PFLU_RS03780 0.76 -0.5 865,464 + PFLU_RS03780 0.83 +1.4 865,464 + PFLU_RS03780 0.83 +1.3 865,464 + PFLU_RS03780 0.83 -0.1 865,464 + PFLU_RS03780 0.83 -1.6 865,465 - PFLU_RS03780 0.84 +0.9 865,533 + PFLU_RS03780 0.87 +1.4 865,534 - PFLU_RS03780 0.87 -1.7 865,534 - PFLU_RS03780 0.87 +1.1 865,592 + PFLU_RS03780 0.90 -0.5 865,593 - PFLU_RS03780 0.90 +0.2 865,593 - PFLU_RS03780 0.90 -2.3 865,848 + -0.4 865,848 + +1.2 865,848 + -0.9 865,848 + -0.6 865,848 + +0.1 865,848 + -0.1 865,848 + -1.1 865,848 + -1.1 865,848 + -1.4 865,848 + +1.4 865,848 + -0.1 865,848 + +0.1 865,848 + +0.7 865,848 + +0.3 865,848 + +0.8 865,849 - -0.5 865,849 - +1.2 865,849 - +0.9 865,849 - -1.7 865,849 - +0.3 865,849 - -1.4 865,849 - -0.4 865,849 - +0.6 865,849 - +1.1 865,849 - -0.3 865,849 - -0.5 865,849 - -0.8 865,849 - +0.1 865,849 - +0.4 865,849 - -0.3 865,849 - +0.7 865,849 - -0.6 865,849 - +0.2 865,849 - -0.7 865,849 - +0.3 865,849 - +0.5 865,891 + -0.4 865,936 - PFLU_RS03785 0.16 +0.5 866,001 + PFLU_RS03785 0.38 +0.1 866,001 + PFLU_RS03785 0.38 +0.0 866,001 + PFLU_RS03785 0.38 +0.2 866,001 + PFLU_RS03785 0.38 +0.5 866,002 - PFLU_RS03785 0.38 +0.1 866,002 - PFLU_RS03785 0.38 -0.9 866,002 - PFLU_RS03785 0.38 +1.1 866,002 - PFLU_RS03785 0.38 -1.0 866,002 - PFLU_RS03785 0.38 +1.6 866,002 - PFLU_RS03785 0.38 +0.2 866,137 - PFLU_RS03785 0.85 +0.9 866,137 - PFLU_RS03785 0.85 -0.4 866,159 + +0.9 866,159 + +0.2 866,160 - -1.6 866,160 - +0.4 866,215 + +0.7 866,215 + -2.4 866,216 - -0.7 866,216 - +1.2 866,216 - +0.7 866,216 - +0.9 866,216 - -2.4 866,216 - +0.6 866,216 - +1.4 866,217 + +0.6 866,217 + +0.1 866,217 + -0.3 866,217 + +0.7 866,218 - -1.4 866,218 - +0.2 866,218 - +0.0 866,218 - -0.0 866,218 - -0.6 866,218 - -2.0 866,218 - -0.4 866,295 + PFLU_RS03790 0.24 +0.4 866,295 + PFLU_RS03790 0.24 -2.5 866,296 - PFLU_RS03790 0.24 +0.1 866,296 - PFLU_RS03790 0.24 +0.8 866,296 - PFLU_RS03790 0.24 -0.1 866,296 - PFLU_RS03790 0.24 +0.4 866,364 - PFLU_RS03790 0.38 +0.8 866,364 - PFLU_RS03790 0.38 -0.2 866,364 - PFLU_RS03790 0.38 -0.1 866,364 - PFLU_RS03790 0.38 +0.0 866,380 + PFLU_RS03790 0.41 -0.8 866,381 - PFLU_RS03790 0.42 +0.9 866,680 + -0.0 866,680 + -0.2 866,680 + -0.4 866,680 + +0.4 866,680 + -0.9 866,680 + +0.1 866,680 + -0.1 866,681 - -0.0 866,681 - +1.0 866,681 - +0.4 866,681 - +0.8 866,681 - -0.2 866,681 - +0.3 866,684 + -0.3 866,684 + +0.2 866,685 - +0.2 866,685 - +0.7 866,685 - +0.5 866,813 + -0.1 866,813 + -0.2 866,813 + -0.5 866,857 - +0.7 866,857 - -0.8 866,857 - +0.8 866,985 - +0.9 867,027 - -0.2 867,027 - +0.6 867,027 - -0.3 867,436 + +0.5 867,437 - -0.2 867,456 + +0.9 867,457 - -0.1 867,457 - +0.5 867,499 - +0.4 867,505 + +0.4 867,505 + -1.7 867,505 + +0.5 867,505 + +0.8 867,506 - -0.6 867,506 - -0.1 867,506 - -0.2 867,506 - +0.3 867,506 - -0.7 867,506 - +1.3 867,506 - -1.9 867,510 - -1.3 867,510 - +0.1 867,510 - +1.1 867,517 + -0.4 867,517 + +0.4 867,517 + -0.5 867,517 + +0.7 867,518 - +0.5 867,518 - -1.0 867,518 - -0.3 867,518 - +0.7 867,533 + +1.3 867,534 - +0.9 867,534 - +0.5 867,534 - +0.5 867,537 + -0.1 867,537 + -0.8 867,537 + -0.2 867,537 + -0.3 867,537 + -0.9 867,537 + -1.5 867,537 + +0.9 867,537 + -1.6 867,537 + -0.1 867,537 + +0.3 867,537 + +0.4 867,537 + -1.1 867,537 + +0.7 867,538 - -1.4 867,538 - +0.4 867,538 - +0.3 867,538 - -1.9 867,538 - +1.0 867,538 - +0.0 867,538 - +1.2 867,538 - +0.3 867,538 - -0.9 867,538 - +0.7 867,539 + +0.4 867,540 - +0.9 867,540 - -1.7
Or see this region's nucleotide sequence