Strain Fitness in Pseudomonas simiae WCS417 around PS417_03865

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
867,512	-		PS417_03855	0.49	-0.2
867,512	-		PS417_03855	0.49	+0.5
867,512	-		PS417_03855	0.49	+0.5
867,512	-		PS417_03855	0.49	+0.2
867,975	-		PS417_03855	0.85	-0.5
868,041	+				-2.0
868,152	+				-0.2
868,152	+				-1.7
868,153	-				+0.2
868,153	-				+0.5
868,155	+				-0.7
868,155	+				-0.3
868,156	-				+0.3
868,156	-				+1.0
868,174	-				-0.3
868,205	+				+0.4
868,355	+				+0.3
868,401	+				+2.0
868,417	+				-0.3
868,483	+				+0.3
868,483	+				-0.1
868,484	-				-1.3
868,484	-				-0.1
868,595	+		PS417_03865	0.22	-0.5
868,700	+		PS417_03865	0.39	-0.3
868,700	+		PS417_03865	0.39	-1.5
868,701	-		PS417_03865	0.39	-2.0
868,701	-		PS417_03865	0.39	-0.9
868,704	+		PS417_03865	0.39	-0.2
868,704	+		PS417_03865	0.39	-0.3
869,069	+				-0.0
869,085	+				+0.6
869,085	+				-0.2
869,085	+				+1.1
869,085	+				+0.7
869,145	+				+1.5
869,200	-				-0.3
869,300	+		PS417_03870	0.24	+0.1
869,300	+		PS417_03870	0.24	-0.4
869,489	+		PS417_03870	0.64	+0.4
869,554	+		PS417_03870	0.78	+0.7
869,606	+		PS417_03870	0.89	-1.2
869,606	+		PS417_03870	0.89	-0.5
869,606	+		PS417_03870	0.89	-0.3
869,707	+				-0.0
869,707	+				+1.1
869,707	+				-1.0
869,707	+				-0.1
869,707	+				-0.9
869,720	+				+0.2
870,070	+		PS417_03875	0.60	-0.0
870,071	-		PS417_03875	0.61	-0.6
870,072	+		PS417_03875	0.61	-1.8