Strain Fitness in Pseudomonas simiae WCS417 around PS417_00365

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
70,178	-				+1.4
70,204	-				+0.2
70,204	-				+0.7
70,260	+				-0.4
70,372	-				-0.4
70,372	-				-1.2
70,375	+				+0.3
70,375	+				+0.7
70,376	-				+3.2
70,376	-				-0.6
70,376	-				-1.4
70,376	-				+1.1
70,376	-				-1.3
70,376	-				-0.2
70,376	-				+0.5
70,376	-				-0.2
70,452	-				+0.2
70,452	-				-0.2
70,768	-		PS417_00365	0.14	-0.7
70,780	-		PS417_00365	0.15	+0.1
70,832	+		PS417_00365	0.17	-0.2
70,890	-		PS417_00365	0.20	+3.3
70,920	-		PS417_00365	0.21	-0.3
71,184	-		PS417_00365	0.33	+0.1
71,184	-		PS417_00365	0.33	+0.3
71,308	-		PS417_00365	0.39	-0.4
71,350	-		PS417_00365	0.41	+0.4
71,378	+		PS417_00365	0.43	-1.8
71,602	-		PS417_00365	0.53	-0.4
71,681	+		PS417_00365	0.57	-0.4
71,736	+		PS417_00365	0.59	+0.8
71,736	+		PS417_00365	0.59	-0.9
71,737	-				-0.4
71,937	+		PS417_00365	0.69	-0.6
71,937	+		PS417_00365	0.69	-0.8
71,938	-		PS417_00365	0.69	-0.8
71,939	+		PS417_00365	0.69	-0.5
71,940	-		PS417_00365	0.69	+0.2
71,940	-		PS417_00365	0.69	-2.4
72,320	+		PS417_00365	0.87	+2.0
72,423	+				-2.7
72,424	-				+0.5
72,424	-				+0.6
72,444	-				+0.4
72,584	+				+0.8
72,585	-				+0.6
72,591	-				+0.5
73,183	-		PS417_00370	0.66	+0.4
73,440	+				-0.8
73,465	+				-0.4