Strain Fitness in Pseudomonas simiae WCS417 around PS417_02960
Experiment: Doxycycline hyclate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Doxycycline hyclate 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
675,877 | + | PS417_02955 | 0.34 | -0.3 | |
675,878 | - | PS417_02955 | 0.34 | -1.2 | |
676,708 | + | +0.6 | |||
676,911 | + | PS417_02960 | 0.23 | +0.4 | |
676,912 | - | PS417_02960 | 0.23 | -0.3 | |
676,948 | + | PS417_02960 | 0.27 | -0.4 | |
676,949 | - | PS417_02960 | 0.28 | -0.6 | |
677,534 | - | -0.1 | |||
677,534 | - | +0.5 | |||
677,534 | - | +0.5 | |||
677,534 | - | +0.5 | |||
677,788 | + | +1.5 | |||
677,867 | - | +0.9 |
Or see this region's nucleotide sequence