Strain Fitness in Pseudomonas simiae WCS417 around PS417_02945
Experiment: Doxycycline hyclate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Doxycycline hyclate 0.001 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 674,441 | - | PS417_02950 | 0.18 | +1.2 | |
| 674,441 | - | PS417_02950 | 0.18 | +2.3 | |
| 674,460 | - | PS417_02950 | 0.19 | +1.2 | |
| 675,161 | - | PS417_02950 | 0.89 | +0.3 | |
| 675,185 | - | +0.8 | |||
| 675,245 | - | +1.5 | |||
| 675,250 | - | +0.0 | |||
| 675,250 | - | +0.7 | |||
| 675,250 | - | -0.3 | |||
| 675,250 | - | +0.4 | |||
| 675,250 | - | +0.2 | |||
| 675,250 | - | -0.5 | |||
| 675,250 | - | +0.3 |
Or see this region's nucleotide sequence