Strain Fitness in Pseudomonas simiae WCS417 around PS417_28385

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
6,125,796	+		PS417_28380	0.13	+0.8
6,125,796	+		PS417_28380	0.13	+0.0
6,125,796	+		PS417_28380	0.13	-0.6
6,125,797	-		PS417_28380	0.13	+0.9
6,125,797	-		PS417_28380	0.13	-1.0
6,125,817	+		PS417_28380	0.15	-1.3
6,125,829	+		PS417_28380	0.16	-0.8
6,126,075	+		PS417_28380	0.41	-0.8
6,126,075	+		PS417_28380	0.41	+0.8
6,126,076	-		PS417_28380	0.41	-0.3
6,126,079	+		PS417_28380	0.41	-0.9
6,126,079	+		PS417_28380	0.41	-1.1
6,126,080	-		PS417_28380	0.41	+0.0
6,126,080	-		PS417_28380	0.41	+0.9
6,126,080	-		PS417_28380	0.41	-0.8
6,126,312	+		PS417_28380	0.65	-0.1
6,126,313	-		PS417_28380	0.65	+0.5
6,126,313	-		PS417_28380	0.65	-1.0
6,126,563	-				+2.3
6,126,716	-				-0.3
6,126,725	+				-0.8
6,126,725	+				+1.8
6,126,725	+				-1.6
6,126,772	+				-0.0
6,126,773	-				-1.3
6,126,773	-				-1.6
6,126,816	+				+0.3
6,127,045	-		PS417_28385	0.20	-0.1
6,127,045	-		PS417_28385	0.20	-0.3
6,127,045	-		PS417_28385	0.20	+0.1
6,127,256	+		PS417_28385	0.31	+0.7
6,127,270	+		PS417_28385	0.31	-0.2
6,127,271	-		PS417_28385	0.31	+0.5
6,127,272	+		PS417_28385	0.32	+0.1
6,127,272	+		PS417_28385	0.32	-0.5
6,127,272	+		PS417_28385	0.32	+0.7
6,127,272	+		PS417_28385	0.32	-0.3
6,127,273	-		PS417_28385	0.32	-0.1
6,127,273	-		PS417_28385	0.32	-0.5
6,127,273	-		PS417_28385	0.32	-0.4
6,127,273	-		PS417_28385	0.32	+0.0
6,127,273	-		PS417_28385	0.32	-0.6
6,127,505	+		PS417_28385	0.44	-0.1
6,127,602	+		PS417_28385	0.49	-0.3
6,127,701	+		PS417_28385	0.54	-0.5
6,127,701	+		PS417_28385	0.54	-2.0
6,127,701	+		PS417_28385	0.54	-0.6
6,127,702	-		PS417_28385	0.54	+0.1
6,127,702	-		PS417_28385	0.54	-0.9
6,127,702	-		PS417_28385	0.54	-0.2
6,127,705	+		PS417_28385	0.54	-0.5
6,127,705	+		PS417_28385	0.54	-0.3
6,127,705	+		PS417_28385	0.54	-2.4
6,127,706	-		PS417_28385	0.54	+0.8
6,127,874	+		PS417_28385	0.63	-0.2
6,127,874	+		PS417_28385	0.63	-0.5
6,127,875	-		PS417_28385	0.63	-0.3
6,127,994	-		PS417_28385	0.69	-0.4
6,128,386	+				-0.9
6,128,386	+				-0.3
6,128,387	-				-0.5
6,128,602	-				-0.9
6,128,641	+				+2.7
6,128,642	-				-0.2
6,128,642	-				+3.0
6,128,658	+				-0.4
6,128,659	-				-3.1
6,128,659	-				+0.6
6,128,773	+				+0.4
6,128,774	-				-2.4
6,129,029	-		PS417_28390	0.43	+0.3
6,129,228	-		PS417_28390	0.75	+0.8
6,129,320	-		PS417_28390	0.90	-0.4
6,129,320	-		PS417_28390	0.90	+0.1