Strain Fitness in Pseudomonas simiae WCS417 around PS417_28340

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
6,116,407	+		PS417_28335	0.35	+0.8
6,116,407	+		PS417_28335	0.35	+0.2
6,116,407	+		PS417_28335	0.35	-0.1
6,116,407	+		PS417_28335	0.35	-1.1
6,116,408	-		PS417_28335	0.35	+0.7
6,116,408	-		PS417_28335	0.35	-0.3
6,116,756	+				+1.7
6,116,756	+		PS417_28335	0.61	+0.1
6,116,757	-		PS417_28335	0.61	-0.1
6,116,881	+		PS417_28335	0.70	+0.0
6,116,882	-		PS417_28335	0.70	-0.2
6,117,056	+		PS417_28335	0.83	-0.8
6,117,060	+		PS417_28335	0.83	+0.1
6,117,060	+		PS417_28335	0.83	+0.1
6,117,061	-				+0.7
6,117,061	-		PS417_28335	0.84	-1.3
6,117,061	-				-0.3
6,117,061	-		PS417_28335	0.84	+0.4
6,117,297	-				+0.1
6,117,314	+				-0.3
6,117,465	+		PS417_28340	0.26	-1.5
6,117,741	+		PS417_28340	0.79	-0.7
6,117,742	-				+1.7
6,117,970	+				+0.6
6,118,011	+				+0.5
6,118,012	-				-0.3
6,118,012	-				+1.7
6,118,126	-		PS417_28345	0.10	-1.1
6,118,176	+		PS417_28345	0.14	-2.3
6,118,474	+		PS417_28345	0.34	-0.4
6,118,475	-		PS417_28345	0.34	+0.1
6,118,475	-				+0.7
6,118,510	-		PS417_28345	0.37	+0.8
6,118,519	-		PS417_28345	0.37	+1.1
6,118,519	-				+1.7
6,118,555	-		PS417_28345	0.40	-0.0
6,118,714	-		PS417_28345	0.51	+0.4
6,118,714	-		PS417_28345	0.51	+0.4