Strain Fitness in Pseudomonas simiae WCS417 around PS417_27405

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
5,910,875	+		PS417_27395	0.61	-0.1
5,910,880	-		PS417_27395	0.62	+0.2
5,910,880	-		PS417_27395	0.62	-0.4
5,911,015	+				+0.6
5,911,038	-		PS417_27395	0.86	+1.2
5,911,145	+				-0.8
5,911,145	+				+1.0
5,911,146	-				-2.4
5,911,146	-				-0.3
5,911,146	-				-0.3
5,911,149	+				+0.6
5,911,149	+				-0.3
5,911,149	+				-0.2
5,911,149	+				-1.6
5,911,150	-				+0.2
5,911,150	-				-1.5
5,911,150	-				-1.0
5,911,150	-				-0.2
5,911,150	-				-0.6
5,911,153	-				-0.7
5,911,153	-				+0.3
5,911,168	+				-0.4
5,911,168	+				-0.4
5,911,168	+				+0.4
5,911,168	+				+1.6
5,911,169	-				+2.4
5,911,169	-				+0.0
5,911,311	+		PS417_27400	0.26	-2.1
5,911,930	+		PS417_27405	0.19	+0.3
5,911,930	+		PS417_27405	0.19	+1.8
5,911,936	+		PS417_27405	0.21	+0.5
5,911,936	+		PS417_27405	0.21	+2.3
5,911,937	-		PS417_27405	0.21	-0.4
5,911,988	+		PS417_27405	0.30	-1.2
5,911,988	+		PS417_27405	0.30	+0.2
5,911,989	-		PS417_27405	0.30	+0.7
5,911,989	-		PS417_27405	0.30	+0.3
5,911,989	-		PS417_27405	0.30	+1.1
5,912,086	-		PS417_27405	0.48	-0.9
5,912,193	+		PS417_27405	0.68	+0.0
5,912,194	-		PS417_27405	0.68	+0.6
5,912,194	-		PS417_27405	0.68	-0.7
5,912,638	+		PS417_27410	0.11	-0.3
5,912,639	-		PS417_27410	0.12	+0.3
5,912,739	+		PS417_27410	0.16	+0.4
5,912,866	-		PS417_27410	0.21	+0.5
5,912,926	-		PS417_27410	0.23	+0.1
5,912,974	-		PS417_27410	0.25	+0.1
5,913,048	+		PS417_27410	0.28	+0.2
5,913,057	+		PS417_27410	0.28	+0.6
5,913,058	-		PS417_27410	0.28	+0.1
5,913,058	-		PS417_27410	0.28	+0.0
5,913,058	-		PS417_27410	0.28	-0.7
5,913,120	+		PS417_27410	0.31	+0.1
5,913,120	+		PS417_27410	0.31	-0.4
5,913,120	+		PS417_27410	0.31	-0.1
5,913,120	+		PS417_27410	0.31	-0.0
5,913,121	-		PS417_27410	0.31	-0.0
5,913,121	-		PS417_27410	0.31	-1.2
5,913,121	-		PS417_27410	0.31	-0.7
5,913,131	-		PS417_27410	0.31	-0.3
5,913,131	-		PS417_27410	0.31	-0.1
5,913,248	+		PS417_27410	0.36	+1.1
5,913,249	-		PS417_27410	0.36	+0.5