Strain Fitness in Pseudomonas simiae WCS417 around PS417_27295

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
5,890,706	-		PS417_27285	0.83	+0.2
5,890,706	-		PS417_27285	0.83	-0.2
5,890,900	+				-1.5
5,890,901	-				+0.3
5,890,901	-				+1.6
5,890,901	-				+0.3
5,891,028	-		PS417_27290	0.15	-2.8
5,891,045	+		PS417_27290	0.18	+0.1
5,891,046	-		PS417_27290	0.18	-1.1
5,891,496	+				+0.6
5,891,497	-				-1.0
5,891,533	+				-1.8
5,891,549	-				-1.5
5,891,553	+				-0.2
5,891,554	-				-2.0
5,891,568	+				-0.6
5,891,569	-				-1.8
5,891,577	+				+1.0
5,891,687	+		PS417_27295	0.22	-2.2
5,891,709	+		PS417_27295	0.32	-1.3
5,891,729	+		PS417_27295	0.42	-2.9
5,891,729	+		PS417_27295	0.42	-0.8
5,891,732	+		PS417_27295	0.43	-1.7
5,891,732	+		PS417_27295	0.43	-0.3
5,892,051	-		PS417_27300	0.64	+0.6
5,892,179	+				+0.4
5,892,187	-				-0.7
5,892,245	+				+0.4
5,892,300	-				-0.4
5,892,345	-				-3.0
5,892,345	-				+2.2
5,892,416	+				-0.1
5,892,417	+				-0.3
5,892,579	+		PS417_27305	0.24	-2.1
5,892,580	-		PS417_27305	0.24	-0.2
5,892,589	+		PS417_27305	0.25	-1.0
5,892,589	+		PS417_27305	0.25	-0.6
5,892,590	-		PS417_27305	0.25	-1.0
5,892,593	+		PS417_27305	0.26	-2.8
5,892,661	+		PS417_27305	0.37	+0.8
5,892,662	-		PS417_27305	0.37	+0.5
5,892,662	-		PS417_27305	0.37	+0.1
5,892,662	-		PS417_27305	0.37	-0.9