Strain Fitness in Pseudomonas simiae WCS417 around PS417_26945

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
5,818,283	+		PS417_26940	0.47	-1.3
5,818,283	+		PS417_26940	0.47	+0.3
5,818,464	-		PS417_26940	0.58	+0.4
5,818,464	-		PS417_26940	0.58	-1.0
5,818,488	-		PS417_26940	0.59	-0.2
5,818,541	-		PS417_26940	0.62	-0.2
5,818,588	-		PS417_26940	0.65	+0.1
5,818,588	-		PS417_26940	0.65	+0.4
5,818,588	-		PS417_26940	0.65	-0.1
5,818,590	+		PS417_26940	0.65	+0.3
5,818,703	+		PS417_26940	0.72	+0.3
5,818,704	-		PS417_26940	0.72	-1.3
5,818,704	-		PS417_26940	0.72	-2.6
5,818,740	-		PS417_26940	0.74	+1.3
5,818,740	-		PS417_26940	0.74	+0.6
5,818,740	-		PS417_26940	0.74	+0.2
5,818,743	+		PS417_26940	0.74	-0.3
5,818,743	+		PS417_26940	0.74	-0.5
5,818,743	+		PS417_26940	0.74	+1.3
5,818,743	+		PS417_26940	0.74	+1.9
5,818,790	+		PS417_26940	0.77	-0.4
5,818,904	+		PS417_26940	0.83	-0.1
5,818,905	-		PS417_26940	0.83	-0.9
5,818,953	+		PS417_26940	0.86	-1.2
5,819,527	+		PS417_26945	0.31	+1.2
5,819,527	+				+2.6
5,819,528	-		PS417_26945	0.32	+1.0
5,819,574	+		PS417_26945	0.36	+0.7
5,819,575	-		PS417_26945	0.36	+0.7
5,819,575	-		PS417_26945	0.36	+0.1
5,819,575	-		PS417_26945	0.36	+0.2
5,819,575	-		PS417_26945	0.36	-1.0
5,819,595	+		PS417_26945	0.38	+0.6
5,819,909	+		PS417_26945	0.67	-2.3
5,819,910	-		PS417_26945	0.67	+0.7
5,820,052	-		PS417_26945	0.81	+0.1
5,820,052	-		PS417_26945	0.81	-1.4
5,820,223	+				+0.4
5,820,345	+				-0.4
5,820,346	-				+4.6
5,820,498	+				+0.5
5,820,498	+				-0.5
5,820,499	-				+1.0
5,820,499	-				+0.0
5,820,499	-				+0.3
5,820,502	+				-0.4
5,820,502	+				+0.3
5,820,502	+				+0.6
5,820,502	+				-1.2
5,820,503	-				-0.5
5,820,503	-				-1.3
5,820,503	-				-0.6
5,820,503	-				+0.7
5,820,503	-				+0.4
5,820,573	+				+0.6
5,820,830	+		PS417_26950	0.39	+2.2
5,820,831	-		PS417_26950	0.39	-1.3
5,820,831	-		PS417_26950	0.39	-1.1
5,821,059	+		PS417_26950	0.65	+0.2
5,821,059	+		PS417_26950	0.65	-2.0
5,821,059	+		PS417_26950	0.65	+0.8
5,821,059	+		PS417_26950	0.65	+0.1
5,821,059	+		PS417_26950	0.65	-0.4
5,821,059	+		PS417_26950	0.65	+0.1
5,821,060	-		PS417_26950	0.65	+0.0
5,821,062	+		PS417_26950	0.65	-1.6
5,821,062	+		PS417_26950	0.65	-0.6
5,821,063	-		PS417_26950	0.66	+0.1
5,821,063	-		PS417_26950	0.66	-1.9
5,821,063	-		PS417_26950	0.66	-1.2
5,821,063	-		PS417_26950	0.66	-0.4
5,821,063	-		PS417_26950	0.66	-0.1
5,821,162	+		PS417_26950	0.77	-0.4
5,821,162	+		PS417_26950	0.77	-1.7