Strain Fitness in Pseudomonas simiae WCS417 around PS417_26795

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
5,784,927	+				-2.4
5,784,927	+				-0.2
5,784,927	+				+1.4
5,784,927	+				-0.3
5,784,927	+				-2.4
5,784,928	-				+0.6
5,784,928	-				-0.1
5,784,928	-				+1.1
5,784,928	-				-0.0
5,784,929	+				-1.5
5,784,930	-				+0.5
5,784,930	-				+1.1
5,784,965	+				-1.6
5,784,965	+				+0.2
5,785,082	-		PS417_26790	0.16	+0.1
5,785,341	+		PS417_26790	0.52	-0.0
5,785,342	-		PS417_26790	0.52	+0.0
5,785,524	+		PS417_26790	0.77	+0.6
5,785,524	+		PS417_26790	0.77	+0.3
5,785,582	-		PS417_26790	0.85	+1.1
5,785,582	-		PS417_26790	0.85	+0.3
5,785,734	+				+0.1
5,785,734	+				+0.3
5,786,675	-				-1.7
5,786,742	-				+2.6
5,786,751	-				-0.2
5,786,751	-				-0.5
5,786,751	-				-0.3
5,786,768	-				+0.7
5,786,779	-				-1.7
5,786,783	-				+1.9
5,786,783	-				-1.5
5,786,803	-				+1.0
5,786,803	-				-1.6
5,786,837	-				-0.6
5,786,837	-				+1.4
5,787,005	-		PS417_26800	0.22	-2.6
5,787,020	-		PS417_26800	0.23	-1.2
5,787,040	+		PS417_26800	0.25	-1.9
5,787,040	+		PS417_26800	0.25	-0.6
5,787,041	-		PS417_26800	0.25	+0.6
5,787,041	-		PS417_26800	0.25	-0.4
5,787,041	-		PS417_26800	0.25	-2.9
5,787,041	-		PS417_26800	0.25	+0.3
5,787,041	-		PS417_26800	0.25	-0.9
5,787,041	-		PS417_26800	0.25	-1.7
5,787,075	+		PS417_26800	0.29	+1.6
5,787,076	-		PS417_26800	0.29	-2.1
5,787,116	+		PS417_26800	0.33	-2.6
5,787,116	+		PS417_26800	0.33	-1.0
5,787,116	+		PS417_26800	0.33	-1.5
5,787,117	-		PS417_26800	0.33	-1.6
5,787,117	-		PS417_26800	0.33	-1.7
5,787,120	+		PS417_26800	0.33	-0.0
5,787,132	+		PS417_26800	0.34	-2.8
5,787,208	-		PS417_26800	0.42	-0.5
5,787,216	+		PS417_26800	0.42	-0.0
5,787,216	+		PS417_26800	0.42	-0.4
5,787,217	-		PS417_26800	0.42	-0.5
5,787,217	-		PS417_26800	0.42	-0.7
5,787,217	-		PS417_26800	0.42	+2.8
5,787,217	-		PS417_26800	0.42	+0.3
5,787,409	+		PS417_26800	0.61	-1.6
5,787,409	+		PS417_26800	0.61	-0.3
5,787,410	-		PS417_26800	0.61	-0.3
5,787,494	-		PS417_26800	0.69	+1.0
5,787,546	-		PS417_26800	0.75	-0.2