Strain Fitness in Pseudomonas simiae WCS417 around PS417_25645

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
5,539,623	-				+1.2
5,539,623	-				+1.0
5,539,638	-				-1.3
5,539,718	+				-0.1
5,539,786	+				+2.5
5,539,786	+				+3.7
5,540,415	-		PS417_25645	0.44	+1.3
5,540,641	-		PS417_25645	0.60	+2.1
5,540,667	+		PS417_25645	0.62	+3.0
5,540,670	+		PS417_25645	0.62	+2.9
5,540,687	+		PS417_25645	0.63	+3.5
5,540,687	+		PS417_25645	0.63	+3.1
5,540,732	+		PS417_25645	0.66	+1.8
5,540,732	+		PS417_25645	0.66	+2.8
5,540,733	-		PS417_25645	0.66	+0.9
5,540,916	+		PS417_25645	0.79	+3.0
5,541,042	+		PS417_25645	0.88	+0.6
5,541,222	+				-0.2
5,541,222	+				+0.3
5,541,312	+				-0.1
5,541,313	-				+0.8
5,541,313	-				+0.7
5,541,329	+		PS417_25650	0.11	+1.4
5,541,330	-		PS417_25650	0.11	+1.7
5,541,334	+		PS417_25650	0.11	+1.0
5,541,576	-		PS417_25650	0.33	+0.6
5,541,576	-		PS417_25650	0.33	-0.3
5,541,803	-		PS417_25650	0.54	+1.3