Strain Fitness in Pseudomonas simiae WCS417 around PS417_25200

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
5,460,398	+				-1.0
5,460,398	+				+1.8
5,460,398	+				-1.1
5,460,399	-				-1.1
5,460,399	-				-0.1
5,460,399	-				-0.2
5,460,399	-				+2.5
5,460,399	-				-2.6
5,460,660	+		PS417_25190	0.61	-1.8
5,460,661	-		PS417_25190	0.62	+2.8
5,460,661	-		PS417_25190	0.62	-2.8
5,460,661	-		PS417_25190	0.62	+0.5
5,460,661	-		PS417_25190	0.62	-0.2
5,460,661	-		PS417_25190	0.62	+0.1
5,460,670	-		PS417_25190	0.64	-0.1
5,460,670	-		PS417_25190	0.64	-0.4
5,460,670	-		PS417_25190	0.64	+0.2
5,460,670	-		PS417_25190	0.64	+0.7
5,460,672	+		PS417_25190	0.64	+0.2
5,460,672	+		PS417_25190	0.64	+0.6
5,460,673	-		PS417_25190	0.64	+0.1
5,460,807	+				-0.3
5,460,807	+				-2.0
5,460,809	+				-0.4
5,460,878	-				-1.3
5,460,899	-				+0.3
5,461,076	+				-1.7
5,462,330	+				+1.2
5,462,332	+				+0.6
5,462,332	+				+0.1
5,462,336	+				+0.2
5,462,336	+				-1.3
5,462,336	+				+0.2
5,462,336	+				-0.3
5,462,336	+				+0.0
5,462,338	+				-0.8