Strain Fitness in Pseudomonas simiae WCS417 around PS417_25175

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
5,456,102	-		PS417_25170	0.50	+0.7
5,456,189	+		PS417_25170	0.55	-0.2
5,456,190	-		PS417_25170	0.55	+1.6
5,456,243	-		PS417_25170	0.58	-0.1
5,456,643	-		PS417_25170	0.82	+0.2
5,456,726	-		PS417_25170	0.87	+0.2
5,456,765	-		PS417_25170	0.89	-1.8
5,456,791	+				+0.1
5,456,796	+				-0.8
5,456,997	-				-0.2
5,457,070	+				-0.1
5,457,071	-				-2.2
5,457,214	-		PS417_25175	0.24	+0.5
5,457,300	-		PS417_25175	0.41	-1.3
5,457,332	+		PS417_25175	0.47	-0.6
5,457,338	-		PS417_25175	0.49	-0.6
5,457,342	-		PS417_25175	0.49	-1.1
5,457,407	-		PS417_25175	0.62	-1.5
5,457,514	+		PS417_25175	0.84	-1.1
5,457,671	+				+1.3
5,457,919	-				-1.7
5,457,970	+				-0.0
5,457,971	-				-0.6
5,458,019	+				-0.4
5,458,020	-				+0.1
5,458,070	-				+0.1
5,458,127	-				+0.3
5,458,187	-				-2.2
5,458,262	+				-2.2
5,458,277	+				-1.9
5,458,278	-				-0.7
5,458,327	-				-0.8
5,458,345	+				+0.9
5,458,349	+				-0.1
5,458,349	+				+0.0
5,458,349	+				-0.3
5,458,350	-				+0.6
5,458,350	-				+0.4
5,458,405	-				-0.9
5,458,475	+				-0.4
5,458,480	-				+2.2
5,458,506	-				+0.1
5,458,580	-				+0.0