Strain Fitness in Pseudomonas simiae WCS417 around PS417_23150

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
5,018,588	-				-1.1
5,018,658	-		PS417_23150	0.14	-1.1
5,018,658	-		PS417_23150	0.14	-2.2
5,018,746	-		PS417_23150	0.23	-0.9
5,018,793	-		PS417_23150	0.28	+0.8
5,019,517	-				-1.5
5,019,624	-		PS417_23155	0.16	-1.4
5,019,624	-		PS417_23155	0.16	-1.4
5,019,624	-		PS417_23155	0.16	+0.4
5,019,624	-		PS417_23155	0.16	-2.5
5,019,624	-		PS417_23155	0.16	-2.1
5,019,629	-		PS417_23155	0.17	-2.5
5,019,629	-		PS417_23155	0.17	-1.5
5,019,629	-		PS417_23155	0.17	-0.9
5,019,667	-		PS417_23155	0.22	-1.0
5,019,667	-		PS417_23155	0.22	-3.0
5,019,667	-				-0.2
5,019,670	-		PS417_23155	0.22	-2.1
5,019,670	-		PS417_23155	0.22	-4.2
5,019,688	-		PS417_23155	0.25	-2.3
5,019,688	-		PS417_23155	0.25	-2.0
5,019,688	-		PS417_23155	0.25	-1.7
5,019,982	-		PS417_23155	0.64	+1.3
5,019,982	-		PS417_23155	0.64	+1.2
5,020,141	-		PS417_23155	0.84	+2.5
5,020,141	-		PS417_23155	0.84	+0.7
5,020,259	-				+1.0
5,020,334	-				-1.0
5,020,336	-				-0.5
5,020,336	-				-2.0
5,020,435	-		PS417_23160	0.14	-1.0