Strain Fitness in Pseudomonas simiae WCS417 around PS417_23025

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
4,988,452	+				-1.0
4,988,453	-				+1.0
4,988,610	+				-1.1
4,988,612	+				-0.4
4,988,708	+				-3.9
4,988,746	+				-1.0
4,988,974	+		PS417_23025	0.24	-1.4
4,989,018	+		PS417_23025	0.27	-2.4
4,989,019	-		PS417_23025	0.27	-1.1
4,989,145	-		PS417_23025	0.36	-4.2
4,989,252	+		PS417_23025	0.43	-3.9
4,989,252	+		PS417_23025	0.43	-2.1
4,989,252	+		PS417_23025	0.43	-2.9
4,989,358	-				-0.2
4,989,365	+		PS417_23025	0.51	-2.1
4,989,366	-		PS417_23025	0.51	-2.8
4,989,408	+		PS417_23025	0.54	-4.2
4,989,408	+		PS417_23025	0.54	-2.3
4,989,411	+		PS417_23025	0.54	-0.7
4,989,436	-		PS417_23025	0.56	-3.0
4,989,448	-		PS417_23025	0.57	+0.4
4,989,448	-		PS417_23025	0.57	-3.1
4,989,448	-		PS417_23025	0.57	-2.3
4,989,486	+		PS417_23025	0.59	-1.0
4,989,486	+		PS417_23025	0.59	-0.2
4,989,696	+		PS417_23025	0.74	-3.1
4,989,891	+		PS417_23025	0.87	-5.0
4,989,892	-		PS417_23025	0.87	-2.7
4,989,963	+				-1.5
4,989,963	+				-6.6
4,989,974	+				-1.7
4,989,974	+				-3.2
4,989,975	-				-2.4
4,989,997	+				+0.2
4,989,997	+				-0.6
4,990,080	+				-0.9
4,990,080	+				-0.3
4,990,081	-				+0.6
4,990,103	-				-2.9
4,990,108	+				+2.4
4,990,220	+				-0.1
4,990,871	-		PS417_23035	0.15	-0.3