Strain Fitness in Pseudomonas simiae WCS417 around PS417_22770

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
4,933,480	-				-0.2
4,933,708	+		PS417_22765	0.30	-0.5
4,933,719	+		PS417_22765	0.32	-1.7
4,933,753	+		PS417_22765	0.37	-0.2
4,933,754	-		PS417_22765	0.37	-1.0
4,933,943	+		PS417_22765	0.63	-2.1
4,933,943	+		PS417_22765	0.63	-2.2
4,933,944	-		PS417_22765	0.63	+0.1
4,934,029	+		PS417_22765	0.75	+0.8
4,934,030	-		PS417_22765	0.75	-0.1
4,934,053	-		PS417_22765	0.78	+1.1
4,934,177	+				-0.5
4,934,178	-				+1.6
4,934,178	-				+0.7
4,934,192	+				+0.1
4,934,216	-				-1.0
4,934,229	+				+0.5
4,934,229	+				-0.8
4,934,229	+				+1.6
4,934,229	+				-2.7
4,934,230	-				-0.8
4,934,230	-				+0.5
4,934,230	-				+0.5
4,934,230	-				-0.2
4,934,233	+				-0.0
4,934,233	+				-0.7
4,934,233	+				+0.8
4,934,233	+				-2.0
4,934,234	-				+0.6
4,934,234	-				+1.0
4,934,234	-				+4.7
4,934,347	+		PS417_22770	0.20	+0.1
4,934,546	+		PS417_22770	0.49	-0.8
4,934,547	-		PS417_22770	0.49	+2.8
4,934,561	+		PS417_22770	0.51	-0.1
4,934,834	-				+1.6
4,934,858	-				+1.4
4,934,929	-				+1.6
4,935,020	+				+0.2
4,935,346	+		PS417_22775	0.20	-1.8
4,935,347	-		PS417_22775	0.21	-2.1
4,935,347	-		PS417_22775	0.21	-0.5
4,935,347	-		PS417_22775	0.21	+0.2
4,935,395	+		PS417_22775	0.24	-0.1
4,935,401	+		PS417_22775	0.25	-0.6
4,935,403	+		PS417_22775	0.25	-0.1
4,935,404	-		PS417_22775	0.25	-0.7
4,935,433	+		PS417_22775	0.27	-1.1
4,935,434	-		PS417_22775	0.27	-0.3
4,935,434	-		PS417_22775	0.27	-1.1
4,935,434	-		PS417_22775	0.27	-1.1