Strain Fitness in Pseudomonas simiae WCS417 around PS417_22755

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
4,929,217	+		PS417_22750	0.15	-0.3
4,929,594	+		PS417_22750	0.49	+0.7
4,929,595	-		PS417_22750	0.49	-1.7
4,929,645	+		PS417_22750	0.53	+1.8
4,929,657	+		PS417_22750	0.54	+0.3
4,929,657	+		PS417_22750	0.54	-0.0
4,929,657	+		PS417_22750	0.54	-0.3
4,929,657	+		PS417_22750	0.54	+0.1
4,929,658	-		PS417_22750	0.54	+0.4
4,929,658	-				-1.7
4,929,658	-		PS417_22750	0.54	+2.3
4,929,658	-		PS417_22750	0.54	-0.8
4,929,658	-		PS417_22750	0.54	-0.4
4,929,866	-		PS417_22750	0.73	-0.0
4,929,915	+		PS417_22750	0.77	+0.6
4,929,915	+		PS417_22750	0.77	+0.1
4,929,915	+		PS417_22750	0.77	+1.6
4,929,915	+		PS417_22750	0.77	-0.6
4,929,915	+		PS417_22750	0.77	-0.2
4,929,916	-		PS417_22750	0.77	-1.4
4,930,199	+				-1.3
4,930,362	+				-0.7
4,930,363	-				-2.5
4,930,363	-				+0.8
4,930,363	-				+0.0
4,930,413	+				+1.1
4,930,413	+				+2.9
4,930,458	+				-3.0
4,930,459	-				-0.7
4,930,596	+		PS417_22755	0.14	+0.3
4,930,596	+		PS417_22755	0.14	-1.2
4,930,596	+		PS417_22755	0.14	-0.2
4,930,596	+		PS417_22755	0.14	-1.2
4,930,596	+		PS417_22755	0.14	-0.6
4,930,597	-		PS417_22755	0.14	-0.3
4,930,644	+		PS417_22755	0.15	-0.0
4,930,806	+		PS417_22755	0.21	-1.5
4,931,019	+		PS417_22755	0.28	-0.5
4,931,511	+		PS417_22755	0.44	-1.8
4,931,511	+		PS417_22755	0.44	+0.4
4,931,947	-		PS417_22755	0.58	-0.4
4,931,949	+		PS417_22755	0.58	+0.9
4,931,949	+		PS417_22755	0.58	+0.9
4,931,950	-		PS417_22755	0.59	-1.4
4,931,950	-		PS417_22755	0.59	+0.1
4,932,177	+		PS417_22755	0.66	+0.2
4,932,177	+		PS417_22755	0.66	+0.3
4,932,178	-		PS417_22755	0.66	-0.6
4,932,405	+		PS417_22755	0.74	+0.2
4,932,466	-		PS417_22755	0.76	+1.3
4,932,468	+		PS417_22755	0.76	+0.3
4,932,468	+		PS417_22755	0.76	+0.2
4,932,672	+		PS417_22755	0.82	-0.1
4,932,873	+		PS417_22755	0.89	+0.2
4,932,874	-		PS417_22755	0.89	-0.0
4,932,874	-		PS417_22755	0.89	+0.6
4,932,874	-		PS417_22755	0.89	-0.5
4,932,874	-		PS417_22755	0.89	-1.7
4,932,874	-		PS417_22755	0.89	-0.2
4,933,140	-				-2.5
4,933,174	-				-1.0
4,933,480	-				-0.2
4,933,708	+		PS417_22765	0.30	-0.5
4,933,719	+		PS417_22765	0.32	-1.7
4,933,753	+		PS417_22765	0.37	-0.2
4,933,754	-		PS417_22765	0.37	-1.0
4,933,943	+		PS417_22765	0.63	-2.1
4,933,943	+		PS417_22765	0.63	-2.2
4,933,944	-		PS417_22765	0.63	+0.1
4,934,029	+		PS417_22765	0.75	+0.8
4,934,030	-		PS417_22765	0.75	-0.1
4,934,053	-		PS417_22765	0.78	+1.1
4,934,177	+				-0.5
4,934,178	-				+1.6
4,934,178	-				+0.7
4,934,192	+				+0.1