Strain Fitness in Pseudomonas simiae WCS417 around PS417_22615

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
4,895,990	-		PS417_22605	0.81	+1.0
4,896,262	+				-0.1
4,896,262	+				+0.6
4,896,266	+				-2.8
4,896,267	-				+0.4
4,896,299	+				+0.3
4,896,299	+				-0.6
4,896,300	-				-0.1
4,896,329	+		PS417_22610	0.18	-2.1
4,896,329	+		PS417_22610	0.18	-1.5
4,896,368	+		PS417_22610	0.29	-0.2
4,896,368	+		PS417_22610	0.29	+0.3
4,896,368	+		PS417_22610	0.29	+1.5
4,896,568	-		PS417_22610	0.84	-1.5
4,896,832	-				-0.6
4,896,832	-				-1.6
4,896,834	+				+0.4
4,896,835	-				+0.0
4,896,835	-				-1.0
4,896,944	+		PS417_22615	0.25	-0.7
4,897,058	+		PS417_22615	0.55	-1.2
4,897,059	-		PS417_22615	0.56	+0.2
4,897,059	-		PS417_22615	0.56	-0.2
4,897,059	-		PS417_22615	0.56	-1.4
4,897,130	+		PS417_22615	0.75	+1.1
4,897,131	-		PS417_22615	0.75	-1.6
4,897,324	+				-0.4
4,897,344	+				-0.3
4,897,359	+				-0.1
4,897,359	+				-1.3
4,897,362	+				-0.5
4,897,362	+				-0.8
4,897,363	-				-1.4
4,897,966	-		PS417_22620	0.39	-1.6
4,898,007	+		PS417_22620	0.42	-0.2