Strain Fitness in Pseudomonas simiae WCS417 around PS417_22605

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
4,894,196	+		PS417_22600	0.29	-0.5
4,894,198	+		PS417_22600	0.29	-1.9
4,894,242	-		PS417_22600	0.34	-0.3
4,894,410	+		PS417_22600	0.51	-0.6
4,894,410	+		PS417_22600	0.51	+0.1
4,894,410	+		PS417_22600	0.51	-1.3
4,894,415	-		PS417_22600	0.51	+0.9
4,894,541	+		PS417_22600	0.64	-2.2
4,894,541	+		PS417_22600	0.64	-0.0
4,894,542	-		PS417_22600	0.64	-0.9
4,894,542	-		PS417_22600	0.64	+0.3
4,894,542	-				+2.9
4,894,542	-		PS417_22600	0.64	+1.6
4,894,542	-		PS417_22600	0.64	-0.4
4,894,634	-		PS417_22600	0.73	-2.7
4,894,816	-				-0.4
4,894,948	-				+2.1
4,894,948	-				+1.4
4,895,038	-				+0.5
4,895,151	+		PS417_22605	0.18	-0.5
4,895,152	-		PS417_22605	0.18	-0.2
4,895,152	-		PS417_22605	0.18	-0.6
4,895,193	+		PS417_22605	0.21	-0.8
4,895,194	-		PS417_22605	0.21	-0.8
4,895,194	-		PS417_22605	0.21	+1.1
4,895,194	-		PS417_22605	0.21	+0.7
4,895,194	-		PS417_22605	0.21	-1.0
4,895,199	+		PS417_22605	0.22	-0.5
4,895,361	+		PS417_22605	0.34	-1.2
4,895,427	+		PS417_22605	0.39	-0.4
4,895,442	+		PS417_22605	0.40	-1.3
4,895,726	+		PS417_22605	0.61	+1.8
4,895,727	-		PS417_22605	0.61	-0.0
4,895,727	-		PS417_22605	0.61	-0.1
4,895,813	-		PS417_22605	0.68	-0.6
4,895,841	+		PS417_22605	0.70	-2.6
4,895,841	+		PS417_22605	0.70	-1.3
4,895,841	+		PS417_22605	0.70	-0.4
4,895,841	+		PS417_22605	0.70	-0.6
4,895,843	+		PS417_22605	0.70	+0.6
4,895,843	+		PS417_22605	0.70	-1.5
4,895,843	+		PS417_22605	0.70	-0.1
4,895,843	+		PS417_22605	0.70	-0.3
4,895,843	+		PS417_22605	0.70	-0.1
4,895,843	+		PS417_22605	0.70	-0.8
4,895,844	-		PS417_22605	0.70	-1.6
4,895,844	-		PS417_22605	0.70	-0.1
4,895,990	-		PS417_22605	0.81	+1.0
4,896,262	+				-0.1
4,896,262	+				+0.6
4,896,266	+				-2.8
4,896,267	-				+0.4
4,896,299	+				+0.3
4,896,299	+				-0.6
4,896,300	-				-0.1
4,896,329	+		PS417_22610	0.18	-2.1
4,896,329	+		PS417_22610	0.18	-1.5
4,896,368	+		PS417_22610	0.29	-0.2
4,896,368	+		PS417_22610	0.29	+0.3
4,896,368	+		PS417_22610	0.29	+1.5
4,896,568	-		PS417_22610	0.84	-1.5
4,896,832	-				-0.6
4,896,832	-				-1.6
4,896,834	+				+0.4
4,896,835	-				+0.0
4,896,835	-				-1.0
4,896,944	+		PS417_22615	0.25	-0.7
4,897,058	+		PS417_22615	0.55	-1.2
4,897,059	-		PS417_22615	0.56	+0.2
4,897,059	-		PS417_22615	0.56	-0.2
4,897,059	-		PS417_22615	0.56	-1.4
4,897,130	+		PS417_22615	0.75	+1.1
4,897,131	-		PS417_22615	0.75	-1.6