Strain Fitness in Pseudomonas simiae WCS417 around PS417_22065

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
4,779,333	+				+1.1
4,779,334	-				-1.5
4,779,334	-				+2.0
4,779,365	+				+0.6
4,779,631	+				+1.6
4,779,631	+				+0.3
4,779,667	-				-0.1
4,779,827	+				-0.1
4,779,981	+		PS417_22060	0.40	+1.6
4,780,089	-		PS417_22060	0.69	+0.1
4,780,316	-				-1.9
4,780,321	+				+0.6
4,780,669	+		PS417_22065	0.21	+2.1
4,780,759	+		PS417_22065	0.26	+2.0
4,781,221	+		PS417_22065	0.53	+1.0
4,781,221	+		PS417_22065	0.53	+1.3
4,781,221	+		PS417_22065	0.53	+2.4
4,781,221	+		PS417_22065	0.53	+1.3
4,781,222	-		PS417_22065	0.53	+2.9
4,781,222	-		PS417_22065	0.53	+1.4
4,781,371	+		PS417_22065	0.62	+1.1
4,781,372	-		PS417_22065	0.62	+1.3
4,781,476	+		PS417_22065	0.68	+1.4
4,781,500	+		PS417_22065	0.70	+0.7
4,781,501	-				+2.3
4,781,632	-		PS417_22065	0.78	+1.4
4,781,845	+				+4.0
4,781,857	+				+1.7
4,781,857	+				+0.8
4,781,857	+				+0.9
4,781,858	-				+0.3
4,781,983	+				+1.0
4,781,983	+				+0.9
4,781,984	-				-1.5
4,781,987	+				+1.2
4,781,987	+				+1.8
4,781,987	+				+0.3
4,781,987	+				-0.0
4,781,988	-				+0.1
4,782,074	-				-1.6
4,782,143	+				+1.5
4,782,193	+				-1.0
4,782,209	-				-1.5
4,782,338	+				-1.0
4,782,339	-				-1.1
4,782,339	-				-1.0
4,782,352	+				+0.4
4,782,352	+				+0.3
4,782,352	+				+1.3
4,782,353	-				-1.5
4,782,481	+				+0.3
4,782,481	+				-1.5
4,782,481	+				-0.2
4,782,482	-				+0.1
4,782,498	+				+0.1
4,782,847	+		PS417_22070	0.26	+0.4
4,782,847	+		PS417_22070	0.26	-0.2
4,782,848	-		PS417_22070	0.26	+0.6
4,782,848	-		PS417_22070	0.26	+0.0