Strain Fitness in Pseudomonas simiae WCS417 around PS417_20680

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
4,494,756	+		PS417_20675	0.39	+1.2
4,494,756	+		PS417_20675	0.39	-0.8
4,494,756	+		PS417_20675	0.39	+0.4
4,494,756	+		PS417_20675	0.39	+1.3
4,494,756	+		PS417_20675	0.39	-0.2
4,494,756	+		PS417_20675	0.39	-0.4
4,494,756	+		PS417_20675	0.39	-0.8
4,494,756	+		PS417_20675	0.39	+0.8
4,494,756	+		PS417_20675	0.39	-0.0
4,494,756	+		PS417_20675	0.39	+1.2
4,494,756	+		PS417_20675	0.39	+1.3
4,494,756	+		PS417_20675	0.39	+0.9
4,494,756	+		PS417_20675	0.39	+0.3
4,494,756	+		PS417_20675	0.39	-0.0
4,494,757	-		PS417_20675	0.39	+0.2
4,494,757	-		PS417_20675	0.39	+1.4
4,494,757	-		PS417_20675	0.39	-0.6
4,494,757	-				-1.2
4,494,757	-		PS417_20675	0.39	+0.6
4,494,757	-		PS417_20675	0.39	-1.4
4,494,757	-		PS417_20675	0.39	-0.3
4,494,757	-		PS417_20675	0.39	+1.7
4,494,757	-		PS417_20675	0.39	-2.1
4,494,757	-		PS417_20675	0.39	-0.6
4,494,757	-		PS417_20675	0.39	+1.6
4,494,757	-		PS417_20675	0.39	+0.9
4,494,757	-		PS417_20675	0.39	+0.5
4,494,757	-		PS417_20675	0.39	+0.6
4,494,887	+		PS417_20675	0.48	+0.7
4,494,950	+		PS417_20675	0.52	+0.2
4,494,950	+		PS417_20675	0.52	+0.2
4,494,951	-		PS417_20675	0.53	+0.3
4,494,951	-		PS417_20675	0.53	-2.4
4,494,951	-		PS417_20675	0.53	+1.5
4,495,043	-		PS417_20675	0.59	+0.8
4,495,098	+		PS417_20675	0.63	-1.2
4,495,098	+		PS417_20675	0.63	+0.4
4,495,098	+		PS417_20675	0.63	+0.1
4,495,098	+		PS417_20675	0.63	+1.2
4,495,099	-		PS417_20675	0.63	+1.1
4,495,099	-		PS417_20675	0.63	+0.1
4,495,099	-		PS417_20675	0.63	-1.2
4,495,099	-		PS417_20675	0.63	-1.6
4,495,099	-		PS417_20675	0.63	+0.5
4,495,287	+		PS417_20675	0.77	+0.2
4,495,287	+		PS417_20675	0.77	+0.7
4,495,287	+		PS417_20675	0.77	-1.4
4,495,288	-		PS417_20675	0.77	+0.7
4,495,351	+		PS417_20675	0.81	+0.7
4,495,351	+		PS417_20675	0.81	+0.3
4,495,351	+		PS417_20675	0.81	+1.1
4,495,352	-		PS417_20675	0.81	+0.8
4,495,476	+				+0.6
4,495,509	-				+0.1
4,495,511	+				+0.5
4,495,511	+				+0.4
4,495,512	-				+1.5
4,495,512	-				+1.3
4,495,566	+				+0.8
4,495,574	+				+0.6
4,495,755	-		PS417_20680	0.11	+0.7
4,495,755	-		PS417_20680	0.11	-2.7
4,495,755	-		PS417_20680	0.11	+0.3
4,495,844	-		PS417_20680	0.21	+0.8
4,495,844	-		PS417_20680	0.21	+0.7
4,495,893	-		PS417_20680	0.27	+2.0
4,495,907	+		PS417_20680	0.28	+0.1
4,495,907	+		PS417_20680	0.28	-0.7
4,495,908	-		PS417_20680	0.28	+0.1
4,495,939	+		PS417_20680	0.32	+0.0
4,495,940	-		PS417_20680	0.32	-0.5
4,495,967	+		PS417_20680	0.35	+0.9
4,496,102	+		PS417_20680	0.51	+0.8
4,496,102	+		PS417_20680	0.51	+0.3
4,496,102	+		PS417_20680	0.51	+1.0
4,496,102	+		PS417_20680	0.51	+1.9
4,496,102	+		PS417_20680	0.51	+0.7
4,496,103	-		PS417_20680	0.51	+0.7
4,496,103	-		PS417_20680	0.51	+1.2
4,496,103	-		PS417_20680	0.51	-0.1
4,496,103	-		PS417_20680	0.51	+0.6
4,496,103	-		PS417_20680	0.51	+0.7
4,496,103	-		PS417_20680	0.51	+0.1
4,496,155	+		PS417_20680	0.57	+1.0
4,496,201	-		PS417_20680	0.62	+1.6
4,496,201	-		PS417_20680	0.62	-1.4
4,496,307	-		PS417_20680	0.75	-0.4
4,496,353	+		PS417_20680	0.80	+0.1
4,496,354	-		PS417_20680	0.80	+1.6
4,496,527	+				-0.4
4,496,536	+				+0.8
4,496,536	+				-0.8
4,496,648	+				+1.9
4,496,648	+				+0.3
4,496,648	+				+1.0
4,496,648	+				+1.1
4,496,756	+				-2.2
4,496,820	+				-0.2
4,496,896	+				-0.3
4,496,897	-				+0.7
4,496,897	-				+0.1
4,496,898	+				-0.4
4,496,951	+				+2.0
4,496,975	+				+1.4
4,496,975	+				-1.6
4,497,111	+		PS417_20685	0.23	+4.4
4,497,167	-		PS417_20685	0.30	-0.5
4,497,167	-		PS417_20685	0.30	+2.2
4,497,468	-		PS417_20685	0.68	+0.8
4,497,509	+		PS417_20685	0.73	+0.3
4,497,510	-		PS417_20685	0.73	+0.2